R package penMSM: Estimating Regularized Multi-state Models Using L1 Penalties. Structured fusion Lasso penalized estimation of multi-state models with the penalty applied to absolute effects and absolute effect differences (i.e., effects on transition-type specific hazard rates).

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  1. Rui J. Costa, Moritz Gerstung: The R package ebmstate for disease progression analysis under empirical Bayes Cox models (2022) arXiv