R package MPAT: This package is for conducting multiple phenotype genetic association testings by combining uni-variate summary statistics for each phentype in GWAS. It contains fourteen methods that can beused in a variety of situations. An overall p-value will be returned for assessing the significanceof associations between a SNP and multiple phenotypes. It contains the following functions: PC,PCMinP, PCFisher, PCLC, PCSS, MinP, WI, VC, DSUM, SUM, Wald, mixAda, mixFisher, mix-Tippett, mixVar, mixSD.
Keywords for this software
References in zbMATH (referenced in 2 articles , 1 standard article )
Showing results 1 to 2 of 2.
- Liu, Zhonghua; Barnett, Ian; Lin, Xihong: A comparison of principal component methods between multiple phenotype regression and multiple SNP regression in genetic association studies (2020)
- Liu, Zhonghua; Lin, Xihong: A geometric perspective on the power of principal component association tests in multiple phenotype studies (2019)