postgwas package for R: Facilitates annotation of genes to SNPs using proximity or LD information, creates regional and manhattan plots and contains an interaction network analysis tool for GWAS result data. Special features cover subphenotype (intermediate phenotype) comparison and rare variant display.
Keywords for this software
References in zbMATH (referenced in 2 articles )
Showing results 1 to 2 of 2.
- Mathieu Emily, Nicolas Sounac, Florian Kroell, Magalie Houée-Bigot: Gene-Based Methods to Detect Gene-Gene Interaction in R: The GeneGeneInteR Package (2020) not zbMATH
- Keith, Jonathan M. (ed.): Bioinformatics. Volume II: structure, function, and applications (2017)