• Gudhi

  • Referenced in 43 articles [sw08777]
  • interest for computational topology is topological data analysis, where one is interested in learning topological ... complexes are implemented with a simplex tree data structure. The simplex tree is an efficient...
  • HAP

  • Referenced in 40 articles [sw04870]
  • complexes in the context of topological data analysis...
  • PersistenceImages

  • Referenced in 40 articles [sw41418]
  • underlying space, and tools from topological data analysis can characterize this structure for the purpose ... vector machines, which identify features containing discriminating topological information. Finally, high accuracy inference of parameter...
  • Persistence Landscape

  • Referenced in 18 articles [sw21260]
  • persistence landscapes toolbox for topological statistics. Topological data analysis provides a multiscale description ... statistics and machine learning with topological data analysis. We present an experiment showing that...
  • TDA

  • Referenced in 24 articles [sw15508]
  • package TDA: Statistical Tools for Topological Data Analysis. Tools for the statistical analysis of persistent...
  • SimBa

  • Referenced in 10 articles [sw28063]
  • persistence via Simplicial Batch collapse. In topological data analysis, a point cloud data P extracted...
  • Topology ToolKit

  • Referenced in 6 articles [sw34711]
  • source library and software collection for topological data analysis and visualization. TTK can handle scalar ... robust implementations of key algorithms in topological data analysis...
  • jHoles

  • Referenced in 7 articles [sw15020]
  • persistent homology. Complex networks equipped with topological data analysis are one of the promising tools...
  • RIVET

  • Referenced in 6 articles [sw27770]
  • RIVET is a tool for topological data analysis, and more specifically, for the visualization...
  • TDAstats

  • Referenced in 3 articles [sw31276]
  • package TDAstats: Pipeline for Topological Data Analysis. A comprehensive toolset for any useR conducting topological ... data analysis, specifically via the calculation of persistent homology in a Vietoris-Rips complex ... background on computing persistent homology for topological data analysis, see Otter ... used for nonparametric statistical inference in topological data analysis, read Robinson & Turner...
  • Scikit-tda

  • Referenced in 4 articles [sw31277]
  • Scikit-TDA is a home for Topological Data Analysis Python libraries intended for non-topologists...
  • SECT

  • Referenced in 8 articles [sw38960]
  • glioblastoma: an application of topological and functional data analysis. Glioblastoma multiforme (GBM) is an aggressive ... obtaining molecular data make other readily available forms of data, such as images, an important ... nonparametric modeling approaches than other previously proposed topological summary statistics. When applied to a cohort...
  • HERMES

  • Referenced in 2 articles [sw41012]
  • most popular tools in topological data analysis (TDA), while graph theory has had a significant ... impact on data science. Our earlier work introduced the persistent spectral graph (PSG) theory ... analysis. In PSG theory, families of persistent Laplacian matrices (PLMs) corresponding to various topological dimensions ... rise to additional geometric analysis of the shape of the data. In this work...
  • PersistenceCurves

  • Referenced in 2 articles [sw41417]
  • main tools in the field of Topological Data Analysis (TDA). They contain fruitful information about...
  • kernelTDA

  • Referenced in 1 article [sw41104]
  • kernels present in the framework of Topological Data Analysis (TDA), more specifically: Persistence Scale Space...
  • pyrivet

  • Referenced in 1 article [sw38483]
  • interacting with RIVET. RIVET is a topological data analysis tool which computes and visualizes...
  • lookout

  • Referenced in 1 article [sw42798]
  • using persistent homology, a technique in topological data analysis. Using peak-over-threshold method...
  • TDAmapper

  • Referenced in 1 article [sw15184]
  • Dimensional Data Using Discrete Morse Theory. Topological Data Analysis using Mapper (discrete Morse theory). Generate...
  • Kepler Mapper

  • Referenced in 2 articles [sw39198]
  • high-dimensional data and 3D point cloud data. KeplerMapper can make use of Scikit-Learn ... paper “Topological Methods for the Analysis of High Dimensional Data Sets and 3D Object Recognition...
  • MScomplex

  • Referenced in 3 articles [sw21417]
  • Visual Analysis Using Morse-Smale Complexes. The Morse-Smale complex is a topological data structure ... applications that use this data structure for visualization and analysis of data from various scientific...