• GniCodes

  • Referenced in 9 articles [sw21086]
  • Wanner [Geometric numerical integration. Structure-preserving algorithms for ordinary differential equations. (2002; Zbl 0994.65135)]. They ... Matlab programs for experimenting with structure-preserving algorithms. We start by presenting some typical classes...
  • MultRoot

  • Referenced in 100 articles [sw00604]
  • Algorithm 835: MultRoot - a Matlab package for computing polynomial roots and multiplicities. MultRoot ... error, estimated forward error, and the structure-preserving condition number. The most significant features...
  • Periodic Systems Toolbox

  • Referenced in 6 articles [sw22601]
  • recently developed structure exploiting and structure preserving numerical algorithms for periodic systems which completely avoid...
  • UMAP

  • Referenced in 30 articles [sw34900]
  • UMAP algorithm is competitive with t-SNE for visualization quality, and arguably preserves more ... global structure with superior run time performance. Furthermore, UMAP has no computational restrictions on embedding...
  • DARS

  • Referenced in 1 article [sw03328]
  • Structure-preserving numerical algorithm for solving discrete-time LMI and DARS...
  • WORHP

  • Referenced in 17 articles [sw10824]
  • necessary for the underlying theory and the algorithms based on it. WORHP has been designed ... graph-coloring methods to finite differences, structure-preserving sparse named after Broyden, Fletcher, Goldfarb...
  • VarInt

  • Referenced in 2 articles [sw11255]
  • class of numerical integration algorithms that preserve the differential geometric structure that defines the evolution...
  • QDPA

  • Referenced in 10 articles [sw12759]
  • quadratic dominant pole algorithm (QDPA). The algorithm works directly with the system matrices ... eigenvectors can be used to construct structure-preserving modal approximations and also to improve reduced...
  • BaPCod

  • Referenced in 19 articles [sw09871]
  • using a branch-and-price (column generation) algorithm. The specificity of this prototype ... solver; a branching scheme that preserves the pricing problem structure is offered by default...
  • Unb-DPC

  • Referenced in 7 articles [sw25079]
  • tuberculosis and leprosy. The existing feature encoding algorithms for protein sequence representation such as composition ... method is fast and preserves protein sequence structure information. The experimental results yield SVM based ... significant predictive performance compared to the existing algorithms and will lead to develop a powerful...
  • RNAlign

  • Referenced in 7 articles [sw33856]
  • Secondary Structures. We have developed an algorithm and a computer program for aligning ... homologous RNA sequences. Given a common folding structure for the bank, the program performs ... structure. This method is useful to align sequences that present a common folding structure despite ... extensive divergence of their primary structures. It allows these preserved regions to be precisely distinguished...
  • Algorithm 961

  • Referenced in 3 articles [sw26807]
  • Algorithm 961: Fortran 77 subroutines for the solution of skew-Hamiltonian/Hamiltonian eigenproblems. Skew-Hamiltonian/Hamiltonian ... developed methods exploit and preserve the skew-Hamiltonian/Hamiltonian structure and hence increase the reliability ... this article, we describe the corresponding algorithms which have been implemented in the style...
  • RECFMM

  • Referenced in 6 articles [sw21760]
  • advanced architecture mechanisms. The mathematical structure is preserved and exploited, not obscured nor compromised ... parallel execution -- are employed. RECFMM supports multiple algorithm variants that mark the major advances with...
  • GameShrink

  • Referenced in 11 articles [sw12511]
  • original game. We present an algorithm, GameShrink, for abstracting the game using our isomorphism exhaustively ... number of nodes in a structure we call the signal tree. It is no larger ... introduce approximation methods that do not preserve equilibrium, but nevertheless yield (ex post) provably close...
  • GL2vec

  • Referenced in 1 article [sw32345]
  • graph classification. This paper develops an algorithm which improves Graph2vec. First, we point ... does not always preserve structural information enough to evaluate the structural similarity, because it bundles ... label information and the structural information in extracting subgraphs. Our algorithm overcomes these limitations...
  • EdgeRewire

  • Referenced in 7 articles [sw40656]
  • problem of modifying a given graph’s structure under a given budget ... focus on modifications based on degree-preserving edge rewiring, such that the expected load ... measure-independent heuristic approaches, we propose an algorithm, called extsc{EdgeRewire}, which optimizes a specific...
  • UMDA/S

  • Referenced in 1 article [sw24583]
  • Distribution Algorithm with Nelder-Mead Simplex Search, which utilizes the optimization space structure and parameter ... find the near optimal parameter. Elitist preservation, weighted estimation and mutation are proposed to improve ... compared to existing static methods and search algorithms...
  • Colibri

  • Referenced in 9 articles [sw12043]
  • desirable to track the low-rank structure as the graph evolves over time, efficiently ... standard decompositions such as SVD do not preserve sparsity. This has led to the development ... columns). Additionally, we propose an efficient update algorithm for dynamic, time-evolving graphs, Colibri...
  • aws4SPM

  • Referenced in 1 article [sw04035]
  • have shown, that using a structural adaptive smoothing algorithm based on the Propagation-Separation method ... allows for signal detection while preserving the shape and spatial extent of the activation areas...
  • Meraculous-2D

  • Referenced in 1 article [sw19474]
  • heterozygosity fail to display well-resolved bubble structures in a typical assembly graph and thus ... enhancement of Meraculous2 algorithm, called Meraculous-2D, which preserves haplotypes across variant sites and generates ... accurate assembly of highly heterozygous diploid genomes. Preserving and taking advantage of the allelic variation ... need to pick arbitrary paths through bubble structures. We also enhanced the original diploidy resolution...