
GniCodes
 Referenced in 9 articles
[sw21086]
 Wanner [Geometric numerical integration. Structurepreserving algorithms for ordinary differential equations. (2002; Zbl 0994.65135)]. They ... Matlab programs for experimenting with structurepreserving algorithms. We start by presenting some typical classes...

MultRoot
 Referenced in 100 articles
[sw00604]
 Algorithm 835: MultRoot  a Matlab package for computing polynomial roots and multiplicities. MultRoot ... error, estimated forward error, and the structurepreserving condition number. The most significant features...

Periodic Systems Toolbox
 Referenced in 6 articles
[sw22601]
 recently developed structure exploiting and structure preserving numerical algorithms for periodic systems which completely avoid...

UMAP
 Referenced in 30 articles
[sw34900]
 UMAP algorithm is competitive with tSNE for visualization quality, and arguably preserves more ... global structure with superior run time performance. Furthermore, UMAP has no computational restrictions on embedding...

DARS
 Referenced in 1 article
[sw03328]
 Structurepreserving numerical algorithm for solving discretetime LMI and DARS...

WORHP
 Referenced in 17 articles
[sw10824]
 necessary for the underlying theory and the algorithms based on it. WORHP has been designed ... graphcoloring methods to finite differences, structurepreserving sparse named after Broyden, Fletcher, Goldfarb...

VarInt
 Referenced in 2 articles
[sw11255]
 class of numerical integration algorithms that preserve the differential geometric structure that defines the evolution...

QDPA
 Referenced in 10 articles
[sw12759]
 quadratic dominant pole algorithm (QDPA). The algorithm works directly with the system matrices ... eigenvectors can be used to construct structurepreserving modal approximations and also to improve reduced...

BaPCod
 Referenced in 19 articles
[sw09871]
 using a branchandprice (column generation) algorithm. The specificity of this prototype ... solver; a branching scheme that preserves the pricing problem structure is offered by default...

UnbDPC
 Referenced in 7 articles
[sw25079]
 tuberculosis and leprosy. The existing feature encoding algorithms for protein sequence representation such as composition ... method is fast and preserves protein sequence structure information. The experimental results yield SVM based ... significant predictive performance compared to the existing algorithms and will lead to develop a powerful...

RNAlign
 Referenced in 7 articles
[sw33856]
 Secondary Structures. We have developed an algorithm and a computer program for aligning ... homologous RNA sequences. Given a common folding structure for the bank, the program performs ... structure. This method is useful to align sequences that present a common folding structure despite ... extensive divergence of their primary structures. It allows these preserved regions to be precisely distinguished...

Algorithm 961
 Referenced in 3 articles
[sw26807]
 Algorithm 961: Fortran 77 subroutines for the solution of skewHamiltonian/Hamiltonian eigenproblems. SkewHamiltonian/Hamiltonian ... developed methods exploit and preserve the skewHamiltonian/Hamiltonian structure and hence increase the reliability ... this article, we describe the corresponding algorithms which have been implemented in the style...

RECFMM
 Referenced in 6 articles
[sw21760]
 advanced architecture mechanisms. The mathematical structure is preserved and exploited, not obscured nor compromised ... parallel execution  are employed. RECFMM supports multiple algorithm variants that mark the major advances with...

GameShrink
 Referenced in 11 articles
[sw12511]
 original game. We present an algorithm, GameShrink, for abstracting the game using our isomorphism exhaustively ... number of nodes in a structure we call the signal tree. It is no larger ... introduce approximation methods that do not preserve equilibrium, but nevertheless yield (ex post) provably close...

GL2vec
 Referenced in 1 article
[sw32345]
 graph classification. This paper develops an algorithm which improves Graph2vec. First, we point ... does not always preserve structural information enough to evaluate the structural similarity, because it bundles ... label information and the structural information in extracting subgraphs. Our algorithm overcomes these limitations...

EdgeRewire
 Referenced in 7 articles
[sw40656]
 problem of modifying a given graph’s structure under a given budget ... focus on modifications based on degreepreserving edge rewiring, such that the expected load ... measureindependent heuristic approaches, we propose an algorithm, called extsc{EdgeRewire}, which optimizes a specific...

UMDA/S
 Referenced in 1 article
[sw24583]
 Distribution Algorithm with NelderMead Simplex Search, which utilizes the optimization space structure and parameter ... find the near optimal parameter. Elitist preservation, weighted estimation and mutation are proposed to improve ... compared to existing static methods and search algorithms...

Colibri
 Referenced in 9 articles
[sw12043]
 desirable to track the lowrank structure as the graph evolves over time, efficiently ... standard decompositions such as SVD do not preserve sparsity. This has led to the development ... columns). Additionally, we propose an efficient update algorithm for dynamic, timeevolving graphs, Colibri...

aws4SPM
 Referenced in 1 article
[sw04035]
 have shown, that using a structural adaptive smoothing algorithm based on the PropagationSeparation method ... allows for signal detection while preserving the shape and spatial extent of the activation areas...

Meraculous2D
 Referenced in 1 article
[sw19474]
 heterozygosity fail to display wellresolved bubble structures in a typical assembly graph and thus ... enhancement of Meraculous2 algorithm, called Meraculous2D, which preserves haplotypes across variant sites and generates ... accurate assembly of highly heterozygous diploid genomes. Preserving and taking advantage of the allelic variation ... need to pick arbitrary paths through bubble structures. We also enhanced the original diploidy resolution...