
TIGRESS
 Referenced in 9 articles
[sw23826]
 Inference of Gene REgulation using Stability Selection. BACKGROUND: Inferring the structure of gene regulatory networks ... RESULTS: In this paper, we formulate GRN inference as a sparse regression problem and investigate ... method, least angle regression (LARS) combined with stability selection, for that purpose. We introduce ... call TIGRESS (for Trustful Inference of Gene REgulation with Stability Selection), was ranked among...

Averist
 Referenced in 3 articles
[sw20133]
 which implements an algorithmic approach for the stability analysis of polyhedral switched systems. It implements ... system, and analyzes the graph to infer stability. In the case that the hybrid system...

COCONUT
 Referenced in 40 articles
[sw04760]
 commercial and opensource solver components (inference engines). The first test version of the environment ... been under continuous improvement and stabilization, in particular, during the project P18704N13 sponsored...

DENDRAL
 Referenced in 9 articles
[sw23919]
 theory of chemical stability and within limiting constraints which are inferred from the data...

PersistenceImages
 Referenced in 40 articles
[sw41418]
 persistence image (PI), and prove the stability of this transformation with respect to small perturbations ... containing discriminating topological information. Finally, high accuracy inference of parameter values from the dynamic output...

ADMB
 Referenced in 17 articles
[sw07416]
 model builder: using automatic differentiation for statistical inference of highly parameterized complex nonlinear models. Many ... advantages of ADMB are flexibility, speed, precision, stability and builtin methods to quantify uncertainty...

c060
 Referenced in 3 articles
[sw24284]
 package c060: Extended Inference for Lasso and ElasticNet Regularized Cox and Generalized Linear Models ... c060 provides additional functions to perform stability selection, model validation and parameter tuning for glmnet...

ForneyLab
 Referenced in 2 articles
[sw27938]
 implemented by ForneyLab with automatic differentiation variational inference (ADVI) and Monte Carlo methods as implemented ... stability issues, ForneyLab appears to enjoy an edge relative to its competitors for automated inference...

RNAseqNet
 Referenced in 0 articles
[sw20077]
 also be used for the inference and the Stability Approach for Regularization Selection (StARS...

RobustMRC
 Referenced in 1 article
[sw42463]
 sensitivity, over stability and generalization. Specifically, we first use a natural language inference module ... issues of over sensitivity and over stability. Then in the machine reading comprehension module...

accuracy
 Referenced in 2 articles
[sw25836]
 inferences. The tools included in accuracy include a framework for gauging the computational stability...

Stan Math
 Referenced in 6 articles
[sw36869]
 computational challenges in optimization and statistical inference grow ever harder, algorithms that utilize derivatives ... functions are evaluated lazily for improved scalability. Stability is achieved by taking care with arithmetic...

spinyReg
 Referenced in 4 articles
[sw14821]
 originality of the work is to consider inference through relaxing the model and using ... selection algorithms (such as lasso, adaptive lasso, stability selection or spikeandslab procedures...

wals
 Referenced in 2 articles
[sw37469]
 Averaging and WeightedAverage Least Squares: Equivariance, Stability, and Numerical Issues. In this article ... estimators provide a coherent way of making inference on the regression parameters of interest ... certain transformations of the explanatory variables, stability, accuracy, computing speed, and outofmemory problems...

POUMM
 Referenced in 1 article
[sw19422]
 stabilizing selection, to quantify the strength of stabilizing selection, to estimate measurement error ... package implements combined maximum likelihood and Bayesian inference of the univariate Phylogenetic OrnsteinUhlenbeck Mixed...

Multitaper.jl
 Referenced in 1 article
[sw35995]
 language. Spectral analysis is widely used to infer physical mechanisms for underlying process dynamics from ... frequency. These have the effect of stabilizing the bias and variance of the spectrum estimator...

ADOLC
 Referenced in 257 articles
[sw00019]
 ADOLC: Automatic Differentiation of C/C++. We present...

ANSYS
 Referenced in 713 articles
[sw00044]
 ANSYS offers a comprehensive software suite that spans...

ATLAS
 Referenced in 199 articles
[sw00056]
 This paper describes the Automatically Tuned Linear Algebra...

AXIOM
 Referenced in 173 articles
[sw00063]
 Axiom is a general purpose Computer Algebra system...