• HyperLogLog

  • Referenced in 20 articles [sw02063]
  • parallelizes optimally and adapts to the sliding window model...
  • OverFeat

  • Referenced in 12 articles [sw17857]
  • show how a multiscale and sliding window approach can be efficiently implemented within a ConvNet...
  • HODMD

  • Referenced in 8 articles [sw34484]
  • seen as superimposed DMD in a sliding window. The new method is illustrated and clarified...
  • RNAshapes

  • Referenced in 7 articles [sw07960]
  • graph output, shape matching and a sliding window approach...
  • SW1PerS

  • Referenced in 7 articles [sw17206]
  • SW1PerS: Sliding windows and 1-persistence scoring; discovering periodicity in gene expression time series data.Background...
  • ChIPOTle

  • Referenced in 5 articles [sw20403]
  • Visual Basic, ChIPOTle uses a sliding window approach that yields improvements in the identification...
  • Seglearn

  • Referenced in 5 articles [sw23641]
  • time series or sequences using a sliding window segmentation approach. The implementation provides a flexible...
  • FoldIndex

  • Referenced in 5 articles [sw35528]
  • more sophisticated fold prediction methods. Sliding windows permit identification of large regions within a protein...
  • MAX-FISM

  • Referenced in 3 articles [sw27584]
  • itemsets over data streams using the sliding window model. Frequent itemset mining from data streams ... speed stream of transactions within a sliding window. According to our algorithm, whenever...
  • GraphChi

  • Referenced in 4 articles [sw34198]
  • small parts, and a novel parallel sliding windows method, GraphChi is able to execute several...
  • SWAKK

  • Referenced in 2 articles [sw22466]
  • positive selection in proteins using a sliding window substitution rate analysis. We present a bioinformatic ... protein-coding DNA sequences, by sliding a 3D window, or sphere, across one reference structure ... server can also perform a sliding window analysis on the primary sequence. The SWAKK...
  • csaw

  • Referenced in 3 articles [sw17944]
  • analysis of ChIP-seq data using sliding windows. Chromatin immunoprecipitation with massively parallel sequencing (ChIP...
  • GeneOptimizer

  • Referenced in 2 articles [sw28665]
  • GeneOptimizer Algorithm: using a sliding window approach to cope with the vast sequence space ... algorithm where a “variation window” covering several amino acid positions slides along the coding sequence ... codons representing the amino acids within the window. The candidate sequences are assessed with...
  • Equi-Clustream

  • Referenced in 1 article [sw26827]
  • drifting concept between the current sliding window and previous sliding window, a Hybrid Data Labeling ... clustering result of the previous sliding window, and a visualization algorithm that analyses the relationship...
  • SigHunt

  • Referenced in 1 article [sw30007]
  • tetranucleotide (4-mer) frequencies using a sliding window approach. Extending the neighbourhood of the sliding ... window, we establish a local kernel density estimate of the 4-mer frequency. We score ... frequencies in the sliding window that deviate from the credibility interval of their local genomic...
  • XANNpred

  • Referenced in 1 article [sw16926]
  • Score). XANNpred results include sliding window plots to show the XANNpred score against the centre ... position of a 61-residue sliding window over the input sequence. We suggest that these ... sliding window plots may be helpful for construct design. If you use XANNpred, please cite...
  • Tigramite

  • Referenced in 2 articles [sw19594]
  • multivariate time series. Further scripts allow sliding window or ensemble analyses; Functions for custom preprocessing...
  • U-Net

  • Referenced in 2 articles [sw33176]
  • outperforms the prior best method (a sliding-window convolutional network) on the ISBI challenge...
  • PPS

  • Referenced in 2 articles [sw18337]
  • periodicities in DNA sequences. Using a sliding window approach, the PPS method can precisely locate...
  • IMEx

  • Referenced in 2 articles [sw14942]
  • uses simple string-matching algorithm with sliding window approach to screen DNA sequences for microsatellites...