• DAFS

  • Referenced in 1 article [sw17125]
  • DAFS: simultaneous aligning and folding of RNA sequences via dual decomposition. Motivation: It is well ... from aligned sequences is a better choice if homologous sequences with reliable alignments are available ... alignments of RNA sequences. To tackle this dilemma, we require a fast and accurate aligner ... DAFS, a novel algorithm that simultaneously aligns and folds RNA sequences based on maximizing expected...
  • Cofolga

  • Referenced in 2 articles [sw12674]
  • program developed performs folding and alignment of two homologous RNAs simultaneously. Cofolga was tested with ... those obtained by a single-sequence folding based on free-energy minimization in which corresponding...
  • ANSYS

  • Referenced in 704 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • SCIP

  • Referenced in 542 articles [sw01091]
  • SCIP is currently one of the fastest non...
  • UCI-ml

  • Referenced in 3403 articles [sw04074]
  • UC Irvine Machine Learning Repository. We currently maintain...
  • CPLEX

  • Referenced in 2773 articles [sw04082]
  • IBM® ILOG® CPLEX® offers C, C++, Java, .NET...
  • ARPACK

  • Referenced in 842 articles [sw04218]
  • ARPACK is a collection of Fortran77 subroutines designed...
  • fda (R)

  • Referenced in 1531 articles [sw04511]
  • fda: Functional Data Analysis , These functions were developed...
  • CVX

  • Referenced in 845 articles [sw04594]
  • CVX is a modeling system for constructing and...
  • Rfam

  • Referenced in 33 articles [sw04637]
  • The Rfam database is a collection of RNA...
  • SAS

  • Referenced in 1555 articles [sw06377]
  • SAS (Statistical Analysis System) is an integrated system...
  • robustbase

  • Referenced in 491 articles [sw07114]
  • R package robustbase: Basic Robust Statistics. ”Essential” Robust...
  • OEIS

  • Referenced in 4221 articles [sw07248]
  • The On-Line Encyclopedia of Integer Sequence. The...
  • BayesDA

  • Referenced in 1310 articles [sw11008]
  • BayesDA: Functions and Datasets for the book ”Bayesian...