• CORO

  • Referenced in 24 articles [sw02197]
  • that they are satisfied through the scenario tree; they are modeled by using a splitting...
  • PySP

  • Referenced in 20 articles [sw04921]
  • mixed-integer components) and the scenario tree model (defining the problem stages and the nature...
  • ScenTrees.jl

  • Referenced in 1 article [sw33838]
  • ScenTrees.jl: A Julia Package for Generating Scenario Trees and Scenario Lattices for Multistage Stochastic Programming ... open-source Julia package for generating scenario trees and scenario lattices which can be used ... stochastic processes in form of a scenario tree in the case of a discrete time...
  • PoMo

  • Referenced in 7 articles [sw35039]
  • species trees. We test the performance of PoMo in several different scenarios of incomplete lineage ... well suited for genome-wide species tree estimation and that on such data...
  • treeQP

  • Referenced in 3 articles [sw25622]
  • Newton strategy based on scenario decomposition; Dual Newton strategy on tree formulation; Interfaces to HPMPC...
  • T-REX

  • Referenced in 8 articles [sw20724]
  • fast and effective methods for inferring phylogenetic trees from complete and incomplete distance matrices ... partial gene transfers, inference of consensus HGT scenarios and interactive HGT identification, developed ... methods allows for validating and visualizing phylogenetic trees and networks which can be built from...
  • RIATA-HGT

  • Referenced in 5 articles [sw17371]
  • between a species tree and a gene tree is computationally very hard (NP-hard). Efficient ... polynomial-time heuristic to handle all HGT scenarios, without any restrictions. The method accurately infers ... analyzing incongruence among species and gene trees. Empirical performance of the method on synthetic...
  • DESPOT

  • Referenced in 4 articles [sw27455]
  • sparse approximation of the standard belief tree, for online planning under uncertainty. A DESPOT focuses ... planning on a set of randomly sampled scenarios and compactly captures the ”execution...
  • SylvX

  • Referenced in 2 articles [sw34226]
  • topologies of the associated gene and species trees. These methods are also used ... host/parasite studies to recover co-diversification scenarios including co-speciation events, host-switches and extinctions ... processes can be graphically represented as nested trees. These interconnected graphs can be visually messy...
  • MetaSim

  • Referenced in 3 articles [sw23453]
  • source genomes and a given evolutionary tree. Conclusions/Significance: MetaSim allows the user to simulate individual ... that can be used as standardized test scenarios for planning sequencing projects or for benchmarking...
  • eHive

  • Referenced in 2 articles [sw27408]
  • multiple whole genome alignments and (3) gene trees with protein homology inference. Finally, we show ... efficiency of the system in real case scenarios...
  • MIForests

  • Referenced in 5 articles [sw22587]
  • learning. In order to leverage the randomized trees for MIL, we define the hidden class ... training set. This limits their applicability in scenarios where the data arrives sequentially...
  • LinearCovarianceModels.jl

  • Referenced in 2 articles [sw37838]
  • well as special models (e.g., Toeplitz, sparse, trees) that are of interest in statistics ... computed reliably. In addition we identify several scenarios for which the estimator is a rational...
  • BART-BMA

  • Referenced in 3 articles [sw23498]
  • forests, a machine learning algorithm which grows trees using a greedy search for the best ... laptop for the “small n large p” scenario which is common in many areas...
  • miLineage

  • Referenced in 1 article [sw34213]
  • dependencies; (ii) localize lineages on the taxonomic tree that are associated with covariates (e.g. disease ... simulation studies under a wide-range of scenarios to evaluate the new methods and demonstrate...
  • HotSpot

  • Referenced in 0 articles [sw38494]
  • rules (displayed in a tree-like structure) that maximize/minimize a target variable/value of interest. With ... example, in a health insurance scenario, find which health insurance groups are at the highest...
  • MUSE

  • Referenced in 1 article [sw16344]
  • value storage engine based on LSM-tree, is used as underlying physical storage module. Secondly ... make trade-off according to different application scenarios by users. Benchmarks show that MUSE...
  • chillR

  • Referenced in 0 articles [sw37637]
  • both cool (chilling) conditions and heat. Fruit tree scientists (pomologists) have developed some metrics ... also includes functions for generating weather scenarios with a weather generator, for conducting climate change...
  • BARON

  • Referenced in 324 articles [sw00066]
  • BARON is a computational system for solving nonconvex...
  • BPMPD

  • Referenced in 40 articles [sw00088]
  • BPMPD is a state-of-the-art implementation...