• iHSP-PseRAAAC

  • Referenced in 16 articles [sw25193]
  • heat shock protein families using pseudo reduced amino acid alphabet composition. Heat shock proteins (HSPs ... been developed by incorporating the reduced amino acid alphabet information into the general form ... remarkable advantages of introducing the reduced amino acid alphabet is being able to avoid ... escaped our notice that the reduced amino acid alphabet approach can also be used...
  • PseKRAAC

  • Referenced in 2 articles [sw34211]
  • server for generating pseudo K-tuple reduced amino acids composition. The reduced amino acids perform ... Encouraged by the success of pseudo-amino acid composition algorithm, we developed a freely available ... called PseKRAAC (the pseudo K-tuple reduced amino acids composition). By implementing reduced amino acid ... their needs by selecting various reduced amino acids alphabets and other characteristic parameters...
  • RaacLogo

  • Referenced in 1 article [sw40051]
  • sequence logo generator by using reduced amino acid clusters. Sequence logos give a fast ... graphical representation of the logo. Reduced amino acids perform powerful ability for simplifying complexity ... sequence logo generator by using reduced amino acid alphabets, RaacLogo can easily generate many different ... tailored to users by selecting various reduced amino acid alphabets that consisted of more than...
  • RAACBook

  • Referenced in 1 article [sw40052]
  • RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using ... Chou’s five-step rule. By reducing amino acid alphabet, the protein complexity ... three parts: (i) 74 types of reduced amino acid alphabet were manually extracted to generate ... reduced amino acid clusters (RAACs) for dealing with unique protein problems. It is easy...
  • iSNO-PseAAC

  • Referenced in 39 articles [sw22446]
  • into the general form of pseudo amino acid composition (PseAAC). The predictor was implemented using ... sites and 810 non-SNO sites. To reduce the homology bias, none of these sites...
  • pLoc-mEuk

  • Referenced in 30 articles [sw24440]
  • enhancing the absolute true rate and in reducing the absolute false rate. Here we propose ... information into the general PseAAC (Pseudo Amino Acid Composition). Rigorous cross-validations on a high...
  • PRED-CLASS

  • Referenced in 5 articles [sw26873]
  • amino acid sequences. The architecture of the individual component networks is kept very simple, reducing...
  • AntAngioCOOL

  • Referenced in 0 articles [sw16129]
  • including: pseudo amino acid composition, k-mer composition, k-mer composition (reduced alphabet), physico-chemical...
  • SPINE-D

  • Referenced in 1 article [sw16912]
  • proteins have different preference for different amino acid residues. Different methods often have ... short and long disordered regions) and reduces it into a two-state prediction afterwards. SPINE...
  • Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • SVMlight

  • Referenced in 264 articles [sw04076]
  • Description (homepage): SVMlight is an implementation of Vapnik...
  • Bioconductor

  • Referenced in 319 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • LIBSVM

  • Referenced in 1185 articles [sw04879]
  • LIBSVM is a library for Support Vector Machines...
  • SAS

  • Referenced in 1555 articles [sw06377]
  • SAS (Statistical Analysis System) is an integrated system...
  • C4.5

  • Referenced in 1164 articles [sw12176]
  • C4.5: programs for machine learning. (C4.5 has been...
  • Python

  • Referenced in 2091 articles [sw14460]
  • Python is a widely used high-level, general...
  • PseAAC

  • Referenced in 31 articles [sw16469]
  • PseAAC: A flexible web server for generating various...