
cta
 Referenced in 1 article
[sw41296]
 computed include model goodnessoffit statistics; likelihood based (cell and linkspecific) residuals ... also compute testinversion–e.g. Wald, profile likelihood, score, powerdivergence–confidence intervals for contingency...

selectMeta
 Referenced in 1 article
[sw06784]
 examples. Some basic properties of the loglikelihood function and computation of a $p$value ... provide an approximate selection bias adjusted profile likelihood confidence interval for the treatment effect...

FEprovideR
 Referenced in 1 article
[sw36818]
 with HighDimensional Parameters. A structured profile likelihood algorithm for the logistic fixed effects model...

metaplus
 Referenced in 1 article
[sw38597]
 with confidence intervals based on the profile likelihood. Robust methods are based on alternative distributions...

poisDoubleSamp
 Referenced in 1 article
[sw30133]
 differential misclassification using double sampling. Wald, profile likelihood, and marginal likelihood confidence intervals are derived...

timedelay
 Referenced in 0 articles
[sw17892]
 lensed quasar images via Bayesian and profile likelihood approaches. The model is based ... that include the time delay. A profile likelihood of the time delay is a simple ... time delay. Both Bayesian and profile likelihood approaches complement each other, producing almost identical results ... more principled but the profile likelihood is easier to implement...

glmmML
 Referenced in 9 articles
[sw07509]
 likelihood function. The fixed effects model is fitted through a profiling approach, which is necessary...

coxphf
 Referenced in 1 article
[sw32658]
 likelihood function). The program fits profile penalized likelihood confidence intervals which were proved to outperform...

FastTree
 Referenced in 9 articles
[sw28979]
 Trees with Profiles instead of a Distance Matrix. FastTree infers approximatelymaximumlikelihood phylogenetic trees...

dirmult
 Referenced in 2 articles
[sw32729]
 parameters in DirichletMultinomial and compute profile loglikelihoods...

gprege
 Referenced in 9 articles
[sw31093]
 noise diagonal) kernel on each profile. One GP kernel is initialised wih a short lengthscale ... likelihoods of the two hypotheses acts as a score of differential expression for the profile...

Clonality
 Referenced in 2 articles
[sw18856]
 analysis of copy number profiles includes a likelihood ratio statistic and reference distribution, as well...

supportInt
 Referenced in 0 articles
[sw18825]
 binomial, Poisson, and normal data likelihood intervals are calculated via root finding algorithm. Additional parameters ... function returns profile likelihoods for each coefficient in the model...

iminuit
 Referenced in 0 articles
[sw33659]
 model parameter error estimates from likelihood profile analysis...

stochprofML
 Referenced in 1 article
[sw33767]
 stochprofML: Stochastic Profiling Using Maximum Likelihood Estimation in R. Tissues are often heterogeneous in their...

pmlr
 Referenced in 1 article
[sw21117]
 Hypothesis testing is conducted via likelihood ratio statistics. Profile confidence intervals (CI) are constructed...

cghseg
 Referenced in 5 articles
[sw06783]
 normalization, and calling for multiple array CGH profiles. This model shows great flexibility, especially ... wave effect that gives a likelihood framework to approaches proposed by others. We propose...

ProFit
 Referenced in 2 articles
[sw28991]
 package ProFit: Bayesian Profile Fitting of Galaxy Images. ProFit is a Bayesian galaxy fitting tool ... likelihood samplers. We present ProFit, a new code for Bayesian twodimensional photometric galaxy profile...

COMODE
 Referenced in 3 articles
[sw36145]
 identify PWMs that maximize the likelihood of observed sequence data under a simple multinomial mixture ... incorporating constraints on the information content profiles or on specific parameters of the motif PWMs ... this extended model are estimated by maximum likelihood using a nonlinear constraint optimization method. Likelihood...

etasFLP
 Referenced in 7 articles
[sw18148]
 while parametric components are estimated through maximum likelihood. The two estimation steps are alternated until ... catalogs are present; also plot, print, summary, profile methods are defined for main output (objects...