• cta

  • Referenced in 1 article [sw41296]
  • computed include model goodness-of-fit statistics; likelihood- based (cell- and link-specific) residuals ... also compute test-inversion–e.g. Wald, profile likelihood, score, power-divergence–confidence intervals for contingency...
  • selectMeta

  • Referenced in 1 article [sw06784]
  • examples. Some basic properties of the log-likelihood function and computation of a $p$-value ... provide an approximate selection bias adjusted profile likelihood confidence interval for the treatment effect...
  • FEprovideR

  • Referenced in 1 article [sw36818]
  • with High-Dimensional Parameters. A structured profile likelihood algorithm for the logistic fixed effects model...
  • metaplus

  • Referenced in 1 article [sw38597]
  • with confidence intervals based on the profile likelihood. Robust methods are based on alternative distributions...
  • poisDoubleSamp

  • Referenced in 1 article [sw30133]
  • differential misclassification using double sampling. Wald, profile likelihood, and marginal likelihood confidence intervals are derived...
  • timedelay

  • Referenced in 0 articles [sw17892]
  • lensed quasar images via Bayesian and profile likelihood approaches. The model is based ... that include the time delay. A profile likelihood of the time delay is a simple ... time delay. Both Bayesian and profile likelihood approaches complement each other, producing almost identical results ... more principled but the profile likelihood is easier to implement...
  • glmmML

  • Referenced in 9 articles [sw07509]
  • likelihood function. The fixed effects model is fitted through a profiling approach, which is necessary...
  • coxphf

  • Referenced in 1 article [sw32658]
  • likelihood function). The program fits profile penalized likelihood confidence intervals which were proved to outperform...
  • FastTree

  • Referenced in 9 articles [sw28979]
  • Trees with Profiles instead of a Distance Matrix. FastTree infers approximately-maximum-likelihood phylogenetic trees...
  • dirmult

  • Referenced in 2 articles [sw32729]
  • parameters in Dirichlet-Multinomial and compute profile log-likelihoods...
  • gprege

  • Referenced in 9 articles [sw31093]
  • noise diagonal) kernel on each profile. One GP kernel is initialised wih a short lengthscale ... likelihoods of the two hypotheses acts as a score of differential expression for the profile...
  • Clonality

  • Referenced in 2 articles [sw18856]
  • analysis of copy number profiles includes a likelihood ratio statistic and reference distribution, as well...
  • supportInt

  • Referenced in 0 articles [sw18825]
  • binomial, Poisson, and normal data likelihood intervals are calculated via root finding algorithm. Additional parameters ... function returns profile likelihoods for each coefficient in the model...
  • iminuit

  • Referenced in 0 articles [sw33659]
  • model parameter error estimates from likelihood profile analysis...
  • stochprofML

  • Referenced in 1 article [sw33767]
  • stochprofML: Stochastic Profiling Using Maximum Likelihood Estimation in R. Tissues are often heterogeneous in their...
  • pmlr

  • Referenced in 1 article [sw21117]
  • Hypothesis testing is conducted via likelihood ratio statistics. Profile confidence intervals (CI) are constructed...
  • cghseg

  • Referenced in 5 articles [sw06783]
  • normalization, and calling for multiple array CGH profiles. This model shows great flexibility, especially ... wave effect that gives a likelihood framework to approaches proposed by others. We propose...
  • ProFit

  • Referenced in 2 articles [sw28991]
  • package ProFit: Bayesian Profile Fitting of Galaxy Images. ProFit is a Bayesian galaxy fitting tool ... likelihood samplers. We present ProFit, a new code for Bayesian two-dimensional photometric galaxy profile...
  • COMODE

  • Referenced in 3 articles [sw36145]
  • identify PWMs that maximize the likelihood of observed sequence data under a simple multinomial mixture ... incorporating constraints on the information content profiles or on specific parameters of the motif PWMs ... this extended model are estimated by maximum likelihood using a nonlinear constraint optimization method. Likelihood...
  • etasFLP

  • Referenced in 7 articles [sw18148]
  • while parametric components are estimated through maximum likelihood. The two estimation steps are alternated until ... catalogs are present; also plot, print, summary, profile methods are defined for main output (objects...