• GaussQR

  • Referenced in 98 articles [sw28260]
  • both to facilitate experimentation with positive definite kernels (radial basis functions) and as supplemental content ... book Kernel-Based Approximation Methods in MATLAB available from World Scientific Press. Although...
  • ORBIT

  • Referenced in 38 articles [sw20552]
  • trust-region framework using interpolating Radial Basis Function (RBF) models is employed. The RBF models ... property of conditional positive definiteness yields a natural method for adding additional points. We present...
  • ISUD

  • Referenced in 13 articles [sw34491]
  • group of variables to enter into the basis in order to obtain such a solution ... constructive method that finds this sequence by only using normal pivots on positive coefficients...
  • ProDiGe

  • Referenced in 3 articles [sw12407]
  • machine learning from positive and unlabeled examples. Elucidating the genetic basis of human diseases ... remains time-consuming and expensive. Efficient computational methods are therefore needed to prioritize genes within ... machine learning strategy based on learning from positive and unlabeled examples, which allows to integrate...
  • Spectral

  • Referenced in 5 articles [sw16768]
  • positive semi-axis by the spectral method. The Galerkin spectral method can be used ... varying computational parameters, e.g. the number of basis functions used in the approximation. The package...
  • miTarget

  • Referenced in 4 articles [sw27473]
  • Although several computational miRNA target-gene prediction methods have been proposed, they still have limitations ... target gene prediction. It uses a radial basis function kernel as a similarity measure ... features, categorized by structural, thermodynamic, and position-based features. The latter features are introduced...
  • iROS-gPseKNC

  • Referenced in 8 articles [sw25363]
  • living organisms and being the basis for biological inheritance, is the process of producing ... this paper, by incorporating the dinucleotide position-specific propensity information into the general pseudo nucleotide ... significantly better than the best existing method in sensitivity, specificity, overall accuracy, and stability. Furthermore...
  • VizWear

  • Referenced in 2 articles [sw01001]
  • show information intuitively. This is the basis of our research on wearable computer vision ... only to sensing the wearer’s position and direction, but also to displaying video frames ... view. We have also developed a method for 3-D graphical overlay by applying object...
  • TARQUIN

  • Referenced in 1 article [sw40439]
  • sensitivity of peak positions to experimental conditions. The quantitation methods currently available are generally labor ... TARQUIN algorithm uses a set of basis functions obtained by quantum mechanical simulation using predetermined...
  • mirWIP

  • Referenced in 1 article [sw27474]
  • characteristics form the basis for a quantitative microRNA target prediction method, mirWIP (microRNA targets ... dataset. The mirWIP method can capture all of the known conserved microRNA:mRNA target relationships ... elegans at a lower false positive rate than the current standard methods...
  • ChIP-PaM

  • Referenced in 1 article [sw22385]
  • count modelling at the peak position, 2) pattern matching of a specific tag count distribution ... true transcription factor (TF) binding on the basis of ChIP-Seq data only. An analysis ... genomic data is presented to demonstrate our method. CONCLUSIONS: In a comparison with other existing...
  • maskBAD

  • Referenced in 0 articles [sw37652]
  • exon-based arrays on the basis of correlation of signal intensities from probes within probe ... false positives) errors with high accuracy and we show that our method routinely outperforms previous...
  • PARAssign

  • Referenced in 1 article [sw23107]
  • assignments of protein nuclei on the basis of pseudocontact shifts. The use of paramagnetic ... PARAssign to perform assignment when the positions of the paramagnetic centers are known and unknown ... degree of reliability. This software provides a method for obtaining the assignments of large systems...
  • BQPD

  • Referenced in 1 article [sw06198]
  • problems. If the Hessian matrix Q is positive definite, then a global solution is found ... code implements a null-space active set method with a technique for resolving degeneracy that ... constraint violations. The Devex method for avoiding near-zero pivots is used to promote stability ... take advantage of sparse factors of the basis matrix. Factors of the reduced Hessian matrix...
  • GRALE

  • Referenced in 1 article [sw38812]
  • projected mass densities of Plummer spheres as basis functions. A genetic algorithm then determines ... features common to all solutions. Given the positions of the images and the redshifts ... information contained in the radial images, unlike methods that minimise the residuals of the lens...
  • DNRLMF-MDA

  • Referenced in 1 article [sw23939]
  • miRNA-disease pair by logistic matrix factorization. Positive observations are assigned higher importance levels than ... DNRLMF-MDA usually outperformed other three methods in terms of the area under ROC curve ... ability of DNRLMF-MDA. It provides the basis for understanding disease mechanisms, developing drugs...
  • AMD

  • Referenced in 60 articles [sw00039]
  • Algorithm 837: AMD is a set of routines...
  • ANSYS

  • Referenced in 703 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • ATLAS

  • Referenced in 199 articles [sw00056]
  • This paper describes the Automatically Tuned Linear Algebra...
  • BARON

  • Referenced in 354 articles [sw00066]
  • BARON is a computational system for solving nonconvex...