• Mplus

  • Referenced in 339 articles [sw06511]
  • level and multilevel data, data that come from different populations with either observed or unobserved...
  • Human Mortality

  • Referenced in 106 articles [sw14563]
  • created to provide detailed mortality and population data to researchers, students, journalists, policy analysts...
  • STRUCTURE

  • Referenced in 71 articles [sw13672]
  • using multi-locus genotype data to investigate population structure. Its uses include inferring the presence...
  • JADE

  • Referenced in 137 articles [sw24855]
  • historical data to provide information of progress direction. Both operations diversify the population and improve...
  • Demography

  • Referenced in 16 articles [sw07973]
  • demography: Forecasting Mortality, Fertility, Migration and Population Data. Functions for demographic analysis including lifetable calculations ... functional data analysis of mortality rates, fertility rates, net migration numbers; and stochastic population forecasting...
  • Resampling Stats

  • Referenced in 12 articles [sw06019]
  • drawing repeated samples from the given data, or population suggested by the data...
  • Latent GOLD

  • Referenced in 93 articles [sw11673]
  • seek to separate out or ’un-mix’ data that is assumed to arise ... from a finite number of distinctly different populations...
  • clusterGeneration

  • Referenced in 14 articles [sw23400]
  • covariance/correlation matrices, calculating a separation index (data and population version) for pairs of clusters...
  • StatMatch

  • Referenced in 22 articles [sw11933]
  • Integration of two data sources referred to the same target population which share a number...
  • simPopulation

  • Referenced in 8 articles [sw07951]
  • populations for surveys based on sample data. Simulate populations for surveys based on sample data...
  • CensMixReg

  • Referenced in 7 articles [sw21090]
  • analysis of data from a heterogeneous population. Moreover, data of this kind can be subject ... Another complication arises when measures of each population depart significantly from normality, for instance ... heavy tails or atypical observations. For such data structures, we propose a robust model...
  • fastSTRUCTURE

  • Referenced in 4 articles [sw25207]
  • data sets. Tools for estimating population structure from genetic data are now used ... identify the number of populations represented in a data set and a new hierarchical prior ... detect weak population structure in the data. We test the variational algorithms on simulated data ... values for the number of populations represented in the data, with minimal bias toward detecting...
  • Arlequin

  • Referenced in 5 articles [sw11442]
  • integrated software package for population genetics data analysis. Arlequin ver 3.0 is a software package ... several basic and advanced methods for population genetics data analysis, like the computation of standard ... demographic equilibrium, estimation or parameters from past population expansions, and thorough analyses of population subdivision ... sequence polymorphism. Arlequin can handle several data types like DNA sequences, microsatellite data, or standard...
  • Haploview

  • Referenced in 22 articles [sw11870]
  • linkage disequilibrium statistics and population haplotype patterns from primary genotype data in a visually appealing...
  • Serial SimCoal

  • Referenced in 3 articles [sw24734]
  • population genetics model for data from multiple populations and points in time. We present ... Serial SimCoal, a program that models population genetic data from multiple time points, as with ... ancient DNA data. An extension of SIMCOAL, it also allows simultaneous modeling of complex demographic ... histories, and migration between multiple populations. Further, we incorporate a statistical package to calculate relevant...
  • DIYABC

  • Referenced in 8 articles [sw21021]
  • inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data. DIYABC ... analysis of population history using approximate Bayesian computation on DNA polymorphism data. Version 2.0 implements...
  • gap

  • Referenced in 4 articles [sw24918]
  • genetic data analysis of both population and family data. Currently, it contains functions for sample...
  • SPAGEDi

  • Referenced in 2 articles [sw07534]
  • mapped individuals and/or mapped populations using genotype data of any ploidy level. It can compute ... describing relatedness or differentiation between individuals or populations by pairwise comparisons, and analyse how these ... neighbourhood size). SPAGeDi can also treat data without spatial information, providing global estimates of genetic ... pairwise statistics between individuals or populations. Data from dominant markers such as AFLP or RAPD...
  • REJECTOR

  • Referenced in 3 articles [sw24737]
  • REJECTOR: Software for population history inference from genetic data via a rejection algorithm. We introduce ... comparison of alternate models of population history from genetic data via a rejection algorithm. Through ... genealogies, and hence simulated data, under a model of population history specified by the user...
  • fdatest

  • Referenced in 13 articles [sw19272]
  • novel inferential technique for functional data. The procedure can be used to test different functional ... distributional equality between two or more functional populations, equality of mean function ... functional population to a reference. ITP involves three steps: (i) the representation of data...