
deal.ii
 Referenced in 599 articles
[sw03516]
 independent of the space dimension without unreasonable penalties on runtime and memory consumption...

gss
 Referenced in 289 articles
[sw06099]
 family of smoothing methods derived through roughness penalties that are suitable for both univariate ... author presents a comprehensive treatment of penalty smoothing under a unified framework. Methods are developed...

sparsenet
 Referenced in 85 articles
[sw19133]
 package SparseNet: coordinate descent with nonconvex penalties. We address the problem of sparse selection ... linear models. A number of nonconvex penalties have been proposed in the literature for this ... convergence properties. We characterize the properties of penalties suitable for this approach, study their corresponding ... that assists our pathwise algorithm. The MC+ penalty is ideally suited to this task...

ClustalW
 Referenced in 137 articles
[sw12016]
 alignment through sequence weighting, positionspecific gap penalties and weight matrix choice...

CFSQP
 Referenced in 61 articles
[sw04658]
 objective functions is replaced by an exact penalty function which penalizes nonlinear equality constraint violations ... either requiring that the objective function (penalty function if nonlinear equality constraints are present) decrease ... nonlinear equality constraints, or an exact penalty function if nonlinear equality constraints are present...

Hull
 Referenced in 76 articles
[sw11670]
 arithmetic when possible, with a moderate speed penalty. (Typically a factor...

hgam
 Referenced in 73 articles
[sw11201]
 Modelling. We propose a new sparsitysmoothness penalty for highdimensional generalized additive models...

OSCAR
 Referenced in 49 articles
[sw03026]
 penalized least squares with a geometrically intuitive penalty function that shrinks some coefficients to exactly ... zero. Additionally, this penalty yields exact equality of some coefficients, encouraging correlated predictors that have...

ipfilter
 Referenced in 68 articles
[sw04778]
 merit functions and the updating of penalty parameters. This algorithm decomposes the primaldual step...

CAPUSHE
 Referenced in 53 articles
[sw13365]
 driven method to calibrate such criteria whose penalties are known up to a multiplicative factor...

COBYLA2
 Referenced in 40 articles
[sw05136]
 functions on moving simplices,l_infinity exact penalty function as merit function. Inequality constraints only...

SDPEN
 Referenced in 20 articles
[sw05152]
 DerivativeFree Library  SDPEN: Sequential penalty derivativefree methods for nonlinear constrained optimization. We consider ... derivativefree context a sequential penalty approach for nonlinear programming. This approach consists in solving ... show the viability of the proposed sequential penalty approach...

MAPCLUS
 Referenced in 31 articles
[sw20021]
 mathematical programming optimization procedure based on a penalty function approach, to impose discrete...

DFN
 Referenced in 22 articles
[sw36998]
 variables. Then, we use an exact penalty function to tackle the difficult constraints ... boundconstrained minimization of the proposed exact penalty function. Finally, we use the framework developed...

gamsel
 Referenced in 20 articles
[sw19132]
 Generalized Additive Models. Using overlap grouped lasso penalties, gamsel selects whether a term ... grid of values for the overall penalty lambda, both for gaussian and binomial families...

penalized
 Referenced in 26 articles
[sw06071]
 proportional hazards model with a ridge penalty term. Our approximation method is based...

Complex Optimization Toolbox
 Referenced in 26 articles
[sw14744]
 also possible and is without performance penalty. Included are generalized algorithms for unconstrained nonlinear optimization...

Indclus
 Referenced in 23 articles
[sw20757]
 mathematical programming optimization procedure based on a penalty function approach to impose discrete...

SPIRAL
 Referenced in 22 articles
[sw18399]
 negative loglikelihood objective function with various penalty choices for the regularization terms...

GNMT
 Referenced in 22 articles
[sw26579]
 lengthnormalization procedure and uses a coverage penalty, which encourages generation of an output sentence...