• MySQL

  • Referenced in 132 articles [sw15936]
  • MySQL is an open-source relational database management system (RDBMS...
  • JASPAR

  • Referenced in 42 articles [sw18502]
  • JASPAR: an open‐access database for eukaryotic transcription factor binding profiles. The analysis of regulatory ... specific scoring matrices. JASPAR is an open‐access database of annotated, high‐quality, matrix‐based...
  • IntAct

  • Referenced in 31 articles [sw21665]
  • molecular interaction database. IntAct provides an open source database and toolkit for the storage, presentation...
  • PostgreSQL

  • Referenced in 79 articles [sw15935]
  • PostgreSQL is a powerful, open source object-relational database system. It has more than...
  • Globus Toolkit

  • Referenced in 176 articles [sw09648]
  • open source Globus® Toolkit is a fundamental enabling technology for the ”Grid,” letting people share ... computing power, databases, and other tools securely online across corporate, institutional, and geographic boundaries without...
  • pymatgen

  • Referenced in 15 articles [sw21647]
  • Materials Project REST API, Crystallography Open Database...
  • eXist

  • Referenced in 16 articles [sw01467]
  • eXist: An open source native XML database. With the advent of native and XML enabled ... database systems, techniques for efficiently storing, indexing and querying large collections of XML documents have ... processing architecture of eXist, an Open Source native XML database system. eXist is tightly integrated...
  • Graphviz

  • Referenced in 90 articles [sw01283]
  • Graphviz is open source graph visualization software. Graph visualization is a way of representing structural ... important applications in networking, bioinformatics, software engineering, database and web design, machine learning...
  • ORL face

  • Referenced in 116 articles [sw13799]
  • April 1994 at the lab. The database was used in the context of a face ... different times, varying the lighting, facial expressions (open / closed eyes, smiling / not smiling) and facial ... side movement). A preview image of the Database of Faces is available. The files...
  • ChEMBL

  • Referenced in 10 articles [sw23140]
  • drug discovery. ChEMBL is an Open Data database containing binding, functional and ADMET information...
  • MongoDB

  • Referenced in 21 articles [sw16120]
  • free and open-source cross-platform document-oriented database. Classified as a NoSQL database, MongoDB ... avoids the traditional table-based relational database structure in favor of JSON-like documents with ... MongoDB Inc. and is free and open-source, published under a combination ... MongoDB was the fourth most widely mentioned database engine on the web, and the most...
  • Reactome

  • Referenced in 24 articles [sw14952]
  • free, open-source, curated and peer reviewed pathway database. Our goal is to provide intuitive...
  • VTK

  • Referenced in 120 articles [sw10593]
  • Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics ... supports parallel processing, and integrates with various databases on GUI toolkits such...
  • ToTo

  • Referenced in 3 articles [sw19369]
  • ToTo: an open database for computation, storage and retrieval of tree decompositions. Many NP-hard ... present here {sc ToTo}, an open graph database for computation, storage and rapid retrieval...
  • Cytoscape

  • Referenced in 82 articles [sw09080]
  • Biomolecular Interaction Networks. Cytoscape is an open source software project for integrating biomolecular interaction networks ... powerful when used in conjunction with large databases of protein-protein, protein-DNA, and genetic...
  • T-REKS

  • Referenced in 3 articles [sw22483]
  • being linked to the Protein Repeat DataBase opens the way for large-scale analysis ... request at http://bioinfo.montp.cnrs.fr/?r=t-reks. Protein Repeat DataBase generated by using T-REKS is accessible...
  • OpenCV

  • Referenced in 117 articles [sw11376]
  • Open Source Computer Vision Library) is an open source computer vision and machine learning software ... scene, find similar images from an image database, remove red eyes from images taken using...
  • Freebase

  • Referenced in 22 articles [sw27335]
  • Freebase is a practical, scalable, graph-shaped database of structured general human knowledge, inspired ... data in Freebase has a very open (e.g. Creative Commons, GFDL) license...
  • cPath

  • Referenced in 3 articles [sw35401]
  • Results: We have developed cPath, an open source database and web application for collecting, storing ... available in standard exchange formats from multiple databases, present pathway data to biologists ... software is freely available under the LGPL open source license for academic and commercial...
  • crimedata

  • Referenced in 1 article [sw31042]
  • crimedata: Access Crime Data from the Open Crime Database. Gives convenient access to publicly available ... that are included in the Crime Open Database ....