
TAGster
 Referenced in 2 articles
[sw11869]
 increasingly rely on the use of linkage disequilibrium (LD) tag SNPs to reduce genotyping costs...

lga972
 Referenced in 1 article
[sw35651]
 design features of twostage genetic linkage disequilibrium studies that minimize the genotyping burden. Availability...

ASPBay
 Referenced in 1 article
[sw23422]
 properties of causal genetic variants in linkage disequilibrium with genotyped markers. In a first step...

LDpred
 Referenced in 1 article
[sw33851]
 LDpred (Vilhjalmsson et al. 2015; Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores...

LocusZoom
 Referenced in 1 article
[sw29110]
 signal relative to genomic position, local linkage disequilibrium (LD) and recombination patterns and the positions...

OmegaPlus
 Referenced in 1 article
[sw34973]
 wholegenome data based on linkage disequilibrium. The tool is up to two orders...

dartR
 Referenced in 1 article
[sw38558]
 frequency). Advanced filtering is based on Linkage Disequilibrium and HWE (HardyWeinberg equilibrium). Other functions...

PyPop
 Referenced in 1 article
[sw00746]
 HardyWeinberg equilibrium and patterns of linkage disequilibrium. These statistical results are important to both...

GWAPP
 Referenced in 1 article
[sw29292]
 that includes interactive Manhattan plots and linkage disequilibrium plots. It also facilitates exploratory data analysis...

JLIN
 Referenced in 0 articles
[sw38314]
 JLIN: A java based linkage disequilibrium plotter. Background: A great deal of effort and expense ... complex human disease. Techniques such as Linkage Disequilibrium mapping are being increasingly used to examine ... given analysis. Results: JLIN (Java LINkage disequilibrium plotter) is a software package designed for customisable ... intuitive visualisation of Linkage Disequilibrium (LD) across all common computing platforms. Customisation allows the user...

LDtests
 Referenced in 0 articles
[sw15396]
 package LDtests: Exact tests for Linkage Disequilibrium and HardyWeinberg Equilibrium. Exact tests for Linkage...

epistasis
 Referenced in 0 articles
[sw17801]
 conditional dependent short and longrange linkage disequilibrium structure of genomes and thus reveals aberrant...

Mathematica
 Referenced in 6041 articles
[sw00554]
 Almost any workflow involves computing results, and that...

R
 Referenced in 8728 articles
[sw00771]
 R is a language and environment for statistical...

SPSS
 Referenced in 635 articles
[sw04269]
 SPSS is a computer program used for survey...

PVM
 Referenced in 307 articles
[sw04273]
 PVM (Parallel Virtual Machine) is a software package...

CRAN
 Referenced in 488 articles
[sw04351]
 R is ‘GNU S’, a freely available language...

lattice
 Referenced in 105 articles
[sw04363]
 R package lattice: Lattice Graphics , Lattice is a...

pls
 Referenced in 31 articles
[sw04365]
 R package pls: Partial Least Squares and Principal...

MASS (R)
 Referenced in 292 articles
[sw04479]
 R package MASS: Support Functions and Datasets for...