
kinship2
 Referenced in 6 articles
[sw24917]
 structures that describe family relationships such as kinship and identitybydescent, which ... pedigree object with various criteria, and kinship for the X chromosome...

SPAGEDi
 Referenced in 2 articles
[sw07534]
 also be treated to estimate pairwise kinship or relationship coefficients between individuals (Hardy 2003 ME.pdf ... analyses at the individual level, pairwise kinship, relatedness and fraternity coefficients (with different estimators ... Rousset’s distance between individuals and a kinship analogue based on allele size. Jackknife over...

IdCoefs
 Referenced in 2 articles
[sw34166]
 fast computation of identity coefficients and generalized kinship coefficients. Summary: Computing the probability of identity ... graphical algorithm for efficiently computing all generalized kinship coefficients for n genes. The graphical description ... structure referred to as the kinship graph. Availability: The algorithm is implemented...

gap
 Referenced in 3 articles
[sw24918]
 based designs, probability of familial disease aggregation, kinship calculation, statistics in linkage analysis, and association...

KinshipPrivacy
 Referenced in 1 article
[sw34193]
 maximizing and privacy preserving approach for protecting kinship in genomic databases. Motivation: Rapid ... still be inferred. One such information is kinship. Results: We define two routes kinship privacy ... leak and propose a technique to protect kinship privacy against these risks while maximizing ... offspring results in high risks of kinship privacy, whereas the sharing data from further relatives...

PedKin
 Referenced in 1 article
[sw34169]
 Efficient computation of the kinship coefficients. Results: This paper gives the fastest known algorithms ... computing the kinship coefficient of a set of individuals with a known pedigree, especially ... inbred and compute the appropriate inbreedingadjusted kinship coefficients, which has not been addressed ... literature. The exact kinship algorithm has runningtime O(n2) for an nindividual pedigree...

KinInbcoef
 Referenced in 1 article
[sw10665]
 KinInbcoef: Calculation of Kinship and Inbreeding Coefficients Based on Pedigree Information. KinInbcoef ... program that computes inbreeding and kinship coefficients for general pedigrees using the algorithm proposed...

KAMG
 Referenced in 1 article
[sw28363]
 Ties and Affinity Ties into Adjacency Matrices. Kinship Adjacency Matrix Generator (KAMG) is a browser ... creating adjacency matrices using the information of kinship ties. Specifically, it is capable of converting...

ribd
 Referenced in 1 article
[sw34165]
 computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal ... range of lesserknown coefficients, including generalised kinship coefficients (Karigl (1981) ; Weeks...

optiSel
 Referenced in 0 articles
[sw19437]
 using pedigree or genotype information, and include kinships, kinships at native haplotype segments, and breed...

R
 Referenced in 8601 articles
[sw00771]
 R is a language and environment for statistical...

Pajek
 Referenced in 138 articles
[sw03707]
 Pajek  analysis and visualization of large networks. Pajek...

pls
 Referenced in 30 articles
[sw04365]
 R package pls: Partial Least Squares and Principal...

PLINK
 Referenced in 61 articles
[sw04581]
 PLINK is a free, opensource whole genome...

penalized
 Referenced in 24 articles
[sw06071]
 R package penalized: Efficient approximate kfold and...

JavaScript
 Referenced in 159 articles
[sw06868]
 JavaScript is a scripting language for computers. It...

glmnet
 Referenced in 482 articles
[sw08159]
 R package glmnet: Lasso and elasticnet regularized...

bnlearn
 Referenced in 60 articles
[sw08265]
 R package bnlearn: Bayesian network structure learning, parameter...

spBayes
 Referenced in 330 articles
[sw10160]
 spBayes: An R Package for Univariate and Multivariate...

CFC
 Referenced in 1 article
[sw10666]
 CFC: a tool for monitoring genetic diversity. Monitoring...