• kinship2

  • Referenced in 6 articles [sw24917]
  • structures that describe family relationships such as kinship and identity-by-descent, which ... pedigree object with various criteria, and kinship for the X chromosome...
  • SPAGEDi

  • Referenced in 2 articles [sw07534]
  • also be treated to estimate pairwise kinship or relationship coefficients between individuals (Hardy 2003 ME.pdf ... analyses at the individual level, pairwise kinship, relatedness and fraternity coefficients (with different estimators ... Rousset’s distance between individuals and a kinship analogue based on allele size. Jackknife over...
  • IdCoefs

  • Referenced in 2 articles [sw34166]
  • fast computation of identity coefficients and generalized kinship coefficients. Summary: Computing the probability of identity ... graphical algorithm for efficiently computing all generalized kinship coefficients for n genes. The graphical description ... structure referred to as the kinship graph. Availability: The algorithm is implemented...
  • gap

  • Referenced in 3 articles [sw24918]
  • based designs, probability of familial disease aggregation, kinship calculation, statistics in linkage analysis, and association...
  • Kinship-Privacy

  • Referenced in 1 article [sw34193]
  • maximizing and privacy preserving approach for protecting kinship in genomic databases. Motivation: Rapid ... still be inferred. One such information is kinship. Results: We define two routes kinship privacy ... leak and propose a technique to protect kinship privacy against these risks while maximizing ... offspring results in high risks of kinship privacy, whereas the sharing data from further relatives...
  • PedKin

  • Referenced in 1 article [sw34169]
  • Efficient computation of the kinship coefficients. Results: This paper gives the fastest known algorithms ... computing the kinship coefficient of a set of individuals with a known pedigree, especially ... inbred and compute the appropriate inbreeding-adjusted kinship coefficients, which has not been addressed ... literature. The exact kinship algorithm has running-time O(n2) for an n-individual pedigree...
  • KinInbcoef

  • Referenced in 1 article [sw10665]
  • KinInbcoef: Calculation of Kinship and Inbreeding Coefficients Based on Pedigree Information. KinInbcoef ... program that computes inbreeding and kinship coefficients for general pedigrees using the algorithm proposed...
  • KAMG

  • Referenced in 1 article [sw28363]
  • Ties and Affinity Ties into Adjacency Matrices. Kinship Adjacency Matrix Generator (KAMG) is a browser ... creating adjacency matrices using the information of kinship ties. Specifically, it is capable of converting...
  • ribd

  • Referenced in 1 article [sw34165]
  • computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal ... range of lesser-known coefficients, including generalised kinship coefficients (Karigl (1981) ; Weeks...
  • optiSel

  • Referenced in 0 articles [sw19437]
  • using pedigree or genotype information, and include kinships, kinships at native haplotype segments, and breed...
  • R

  • Referenced in 8601 articles [sw00771]
  • R is a language and environment for statistical...
  • Pajek

  • Referenced in 138 articles [sw03707]
  • Pajek -- analysis and visualization of large networks. Pajek...
  • pls

  • Referenced in 30 articles [sw04365]
  • R package pls: Partial Least Squares and Principal...
  • PLINK

  • Referenced in 61 articles [sw04581]
  • PLINK is a free, open-source whole genome...
  • penalized

  • Referenced in 24 articles [sw06071]
  • R package penalized: Efficient approximate k-fold and...
  • JavaScript

  • Referenced in 159 articles [sw06868]
  • JavaScript is a scripting language for computers. It...
  • glmnet

  • Referenced in 482 articles [sw08159]
  • R package glmnet: Lasso and elastic-net regularized...
  • bnlearn

  • Referenced in 60 articles [sw08265]
  • R package bnlearn: Bayesian network structure learning, parameter...
  • spBayes

  • Referenced in 330 articles [sw10160]
  • spBayes: An R Package for Univariate and Multivariate...
  • CFC

  • Referenced in 1 article [sw10666]
  • CFC: a tool for monitoring genetic diversity. Monitoring...