• LeZi-update

  • Referenced in 18 articles [sw01541]
  • update: An information-theoretic framework for personal mobility tracking in PCS networks The complexity ... cellular environment has been characterized under an information-theoretic framework. Shannon’s entropy measure...
  • SoNIA

  • Referenced in 3 articles [sw12041]
  • longitudinal ”network” data. By dynamic, we mean that in addition to information about the relations ... various entities (actors, nodes) there is also information about when these relations occur ... SoNIA is to read-in dynamic network information from various formats, aid the user ... images or ”movies” of the network, along with information about the techniques and parameter settings...
  • IDTxl

  • Referenced in 3 articles [sw25603]
  • analysis of multivariate information dynamics in networks. The Information Dynamics Toolkit xl (IDTxl ... networks and their node dynamics from multivariate time series data using information theory. IDTxl provides ... network inference: multivariate transfer entropy (TE)/Granger causality (GC), multivariate mutual information (MI), bivariate TE/GC...
  • SQUAD

  • Referenced in 5 articles [sw29353]
  • Qualitative Modeling of Regulatory Networks. The wealth of molecular information provided by high-throughput technologies ... reconstruction of regulatory networks in diverse biological systems. This information, however, has proven ... qualitative information about patterns of expression to infer the regulatory networks that generate such patterns...
  • gNCA

  • Referenced in 4 articles [sw08821]
  • connectivity structure from transcriptional regulatory networks to restrict the decomposition to a unique solution. However ... version of NCA cannot incorporate information beyond the network topology such as information obtained from ... regulatory signals. The ability of incorporating such information enables a more accurate and self-consistent ... which significantly expands the capability of transcription network analysis by incorporating regulatory signal constraints arising...
  • DynaMIT

  • Referenced in 16 articles [sw01808]
  • transportation network, predict future traffic conditions, and provide consistent and unbiased information to travelers ... travelers while the supply reflects the transportation network in terms of infrastructure, traffic flow...
  • FSCNMF

  • Referenced in 1 article [sw32347]
  • negative Matrix Factorization for Embedding Information Networks. Analysis and visualization of an information network ... conduct experiments on real world information networks for different types of machine learning applications such...
  • MetExplore

  • Referenced in 4 articles [sw12274]
  • database (freely available on demand). Information about metabolic networks mainly come from BioCyc-like databases...
  • DIMA

  • Referenced in 4 articles [sw26868]
  • previously shown that domain interaction networks provide substantially novel information with respect to networks built...
  • iHOP

  • Referenced in 5 articles [sw29340]
  • Information Hyperlinked over Proteins) is an online service that provides this gene-guided network ... research. Navigating across interrelated sentences within this network is closer to human intuition than ... stepwise and controlled acquisition of information. Moreover, this literature network can be superimposed upon experimental...
  • Lockr

  • Referenced in 2 articles [sw30796]
  • privacy of their users’ social networking information. Given the highly sensitive nature of the information ... users. First, it separates social networking content from all other functionality that OSNs provide. This ... pling lets users control their own social information: they can decide which OSN provider should...
  • BrainNetVis

  • Referenced in 2 articles [sw21997]
  • vertex metrics), which carry the brain network information. To make the methods clear and understandable...
  • DNA

  • Referenced in 5 articles [sw26923]
  • Conclusions: Examining changes in network structure can provide valuable information about the underlying biochemical pathways...
  • TopoMon

  • Referenced in 4 articles [sw02449]
  • latency of end-to-end network paths. This information is necessary but not sufficient. With ... shared links of the wide-area network. If this occurs, applications may obtain lower network ... Topo Mon, a monitoring tool for Grid networks that augments NWS with additional sensors ... architecture. Our topology consumer process collects route information between the sites of a Grid environment...
  • HubAlign

  • Referenced in 2 articles [sw34150]
  • makes use of both network topology and sequence homology information, based upon the observation that ... protein from the global network topology information. Then HubAlign aligns topologically important proteins first ... gradually extends the alignment to the whole network. Extensive tests indicate that HubAlign greatly outperforms...
  • Plant-mPLoc

  • Referenced in 27 articles [sw22435]
  • proteins in various cellular organelles and pathways. Information of subcellular locations of proteins can provide ... they interact with each other in cellular network systems. Most of the existing methods ... developed by integrating the gene ontology information, functional domain information, and sequential evolutionary information through...
  • ChordLink

  • Referenced in 1 article [sw35792]
  • social networks, biological networks, and information networks. This double structural nature makes it difficult...
  • NetQuest

  • Referenced in 5 articles [sw13969]
  • NetQuest, a flexible framework for large-scale network measurement. We apply Bayesian experimental design ... maximize the amount of information we gain about the network path properties subject to given...
  • BrainNet Viewer

  • Referenced in 8 articles [sw26512]
  • interface (GUI), we developed a graph-theoretical network visualization toolbox, called BrainNet Viewer, to illustrate ... several combinations of defined files with connectome information can be loaded to display different combinations ... such as the color and size of network elements or the layout of the figure ... edges in sequence and displays brain networks in multiple views, as required by the user...
  • MMG

  • Referenced in 4 articles [sw29328]
  • method can easily incorporate information about weights in the network, is robust against missing data...