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clusfind
- Referenced in 427 articles
[sw27805]
- fuzzy clustering); Chapter 5+6 : TWINS.FOR (hierarchical clustering; you can choose between agglomerative and divisive...
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impute
- Referenced in 99 articles
[sw14376]
- input. For example, methods such as hierarchical clustering and K-means clustering are not robust...
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sparcl
- Referenced in 48 articles
[sw16353]
- package sparcl: Perform sparse hierarchical clustering and sparse k-means clustering. Implements the sparse clustering...
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frailtypack
- Referenced in 40 articles
[sw06070]
- frailty model and Cox proportional hazard model. Clustered and recurrent survival times can be studied ... slope). 3) Nested frailty models for hierarchically clustered data (with 2 levels of clustering...
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dynamicTreeCut
- Referenced in 17 articles
[sw12570]
- Methods for detection of clusters in hierarchical clustering dendrograms. Contains methods for detection of clusters ... hierarchical clustering dendrograms...
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Statistics Toolbox
- Referenced in 18 articles
[sw10157]
- bagged decision trees, k-means and hierarchical clustering, k-nearest neighbor search, Gaussian mixtures...
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clustvarsel
- Referenced in 16 articles
[sw07967]
- implements variable selection methodology for model-based clustering which allows to find the (locally) optimal ... without sub-sampling at the hierarchical clustering stage for starting Mclust models. By default...
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RACHET
- Referenced in 10 articles
[sw02342]
- This paper presents a hierarchical clustering method named RACHET (Recursive Agglomeration of Clustering Hierarchies ... volume of a covering hypersphere. For each cluster centroid, RACHET maintains descriptive statistics of constant ... wide class of centroid-based hierarchical clustering algorithms, such as centroid, medoid, and Ward...
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Vlfeat
- Referenced in 39 articles
[sw13478]
- feature detectors, feature extractors, (hierarchical) k-means clustering, randomized kd-tree matching, and super-pixelization...
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PermutMatrix
- Referenced in 13 articles
[sw22075]
- dataset. It implements several types of cluster analysis and a variety of methods for statistical ... work on the use of hierarchical clustering for gene expression data...
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pvclust
- Referenced in 9 articles
[sw07120]
- package pvclust: Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling. pvclust is a package ... assessing the uncertainty in hierarchical cluster analysis. It provides AU (approximately unbiased) p-values...
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SAINTETIQ
- Referenced in 16 articles
[sw02290]
- model named SAINTETIQ. Based on a hierarchical conceptual clustering algorithm, SAINTETIQ incrementally builds a summary...
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HykGene
- Referenced in 9 articles
[sw23981]
- hybrid approach that combines gene ranking and clustering analysis. In this approach, we first applied ... ranked genes, and then applied hierarchical clustering on these genes to generate a dendrogram. Finally...
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fastcluster
- Referenced in 7 articles
[sw12470]
- fastcluster: Fast Hierarchical Clustering Routines for R and Python. This ... Python. It implements fast hierarchical, agglomerative clustering routines. Part of the functionality is designed...
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DIVCLUS-T
- Referenced in 5 articles
[sw02736]
- DIVCLUS-T: a monothetic divisive hierarchical clustering method. DIVCLUS-T is a divisive hierarchical clustering ... categorical data. Like the Ward agglomerative hierarchical clustering algorithm and the k-means partitioning algorithm...
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shallot
- Referenced in 7 articles
[sw26314]
- common in some clustering algorithms (e.g., hierarchical clustering), but we show how to use this...
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CLUSTAG
- Referenced in 7 articles
[sw30040]
- CLUSTAG: hierarchical clustering and graph methods for selecting tag SNPs. Summary: Cluster and set-cover...
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SEP/COP
- Referenced in 4 articles
[sw02820]
- find the best partition in hierarchical clustering based on a new cluster validity index Hierarchical...
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bclust
- Referenced in 6 articles
[sw23381]
- package bclust: Bayesian Hierarchical Clustering Using Spike and Slab Models. Builds a dendrogram using...
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dendextend
- Referenced in 6 articles
[sw16586]
- visualize and compare trees of hierarchical clusterings. You can (1) Adjust a tree’s graphical...