
PSIBLAST
 Referenced in 217 articles
[sw17324]
 word hits, combined with a new heuristic for generating gapped alignments, yields a gapped BLAST...

Hyperheuristics
 Referenced in 133 articles
[sw00424]
 authors as a highlevel heuristic that adaptively controls several lowlevel knowledgepoor heuristics ... only cheap, easytoimplement lowlevel heuristics, we may achieve solution quality approaching that...

FEASPUMP
 Referenced in 122 articles
[sw04802]
 practice. Feasibility Pump (FP) is a heuristic scheme for finding a feasible solution to general ... somehow blind) with more clever rounding heuristics. In particular, we investigate...

BoomerAMG
 Referenced in 144 articles
[sw00086]
 independent set algorithms and the application of heuristic designed to insure the quality...

ILUT
 Referenced in 136 articles
[sw08734]
 based on a strategy which combines two heuristics. This ILUT factorization extends the usual...

MINTO
 Referenced in 132 articles
[sw04587]
 also provides automatic constraint classification, preprocessing, primal heuristics and constraint generation. Moreover, the user...

LKH
 Referenced in 123 articles
[sw04735]
 effective implementation of the LinKernighan heuristic for solving the traveling salesman problem. Computational experiments...

JMEANS
 Referenced in 65 articles
[sw02649]
 MEANS: A new local search heuristic for minimum sum of squares clustering. A new local ... search heuristic, called JMeans, is proposed for solving the minimum sum of squares clustering ... local optimum is reached. The new heuristic is compared with two other wellknown local ... search heuristics, K and HMeans as well as with HMeans+, an improved version...

Chaco
 Referenced in 116 articles
[sw09640]
 effort has been devoted to developing heuristics for this problem. The decomposition problem...

ABACUS
 Referenced in 115 articles
[sw02948]
 cutting planes, column generation, and primal heuristics. ABACUS supports the Open Solver Interface (Osi) developed...

COMET
 Referenced in 70 articles
[sw03051]
 overview of local search including neighborhoods, heuristics, and metaheuristics, the book presents the architecture ... variety of applications, arranged by metaheuristics. It presents scheduling applications, along with the background...

CAPUSHE
 Referenced in 43 articles
[sw13365]
 Slope heuristics: overview and implementation. Model selection is a general paradigm which includes many statistical ... multiplicative factor: the â€śslope heuristicsâ€ť. Theoretical works validate this heuristic method in some situations ... twofold. First, an introduction to the slope heuristics and an overview of the theoretical ... practical difficulties occurring for applying the slope heuristics. A new practical approach is carried...

CirCut
 Referenced in 42 articles
[sw04782]
 Ranktwo relaxation heuristics for MAXCUT and other binary quadratic programs The GoemansWilliamson ... proposed approach leads to continuous optimization heuristics applicable to MAXCUT as well as other ... code based on the ranktwo relaxation heuristics is compared with two state ... algorithm, as well as with a purely heuristic code for effectively solving a particular...

LiteRed
 Referenced in 64 articles
[sw16341]
 package LiteRed is described. It performs the heuristic search of the symbolic IBP reduction rules...

GeneSrF
 Referenced in 62 articles
[sw08254]
 predictive performance. The second is a more heuristic graphical approach that can be used...

Gecode
 Referenced in 60 articles
[sw06272]
 modeling layer; advanced branching heuristics (accumulated failure count, activity); many search engines (parallel, interactive graphical...

Regina
 Referenced in 32 articles
[sw04862]
 Computational topology with Regina: algorithms, heuristics and implementations. Regina is a software package for studying ... literature some of the key algorithms, heuristics and implementations that are central to Regina ... performance. These include the allimportant simplification heuristics, key choices of data structures and algorithms...

TTTPLOTS
 Referenced in 51 articles
[sw07712]
 often the case in local search based heuristics for combinatorial optimization, such as simulated annealing...

QUALEX
 Referenced in 49 articles
[sw04742]
 proved. Within this framework a trust region heuristic is developed. In contrast to usual trust...

PTScotch
 Referenced in 49 articles
[sw07038]
 nested dissection algorithm requires efficient graph bipartitioning heuristics, the best sequential implementations of which...