
parDG
 Referenced in 19 articles
[sw18743]
 which belong to the class of DiffuseInterface models. We develop efficient and reliable numerical...

URDME
 Referenced in 25 articles
[sw10400]
 ReactionDiffusion Master Equation formalism to model the processes under study. An interface...

STEPS
 Referenced in 18 articles
[sw17866]
 STEPS: Modeling and Simulating Complex ReactionDiffusion Systems with Python. We describe ... user interface of the program STEPS. STEPS is a simulation platform for modeling and stochastic ... simulation of coupled reactiondiffusion systems with complex 3dimensional boundary conditions. Setting up such...

MFC
 Referenced in 1 article
[sw34768]
 equation thermodynamicallyconsistent diffuseinterface models we use to handle such flows, which are coupled...

OpenCMISS
 Referenced in 9 articles
[sw11475]
 partial differential equations described by the models and to visualise results. The OpenCMISS code (opencmiss.org ... embedded coronary flow, and the reaction–diffusion equations that govern the propagation of electrical waves ... also discuss the design of the interfaces that link the sets of physical equations across ... these provide a flexible infrastructure for combining models developed across the VPH/Physiome community...

SWAMP
 Referenced in 1 article
[sw02319]
 additional procedures with a userfriendly interface. The model is based on the numerical solution ... partial differential equations describing advectiondiffusion and biological processes on a twodimensional rectangular finite ... elements mesh. The hydraulics and advectiondiffusion modules model were validated both with experimental tracer ... good agreement in both cases. Moreover, the model was tested in critical conditions for mass...

PoreFlow
 Referenced in 1 article
[sw27330]
 distributions, and modeling of reactive solute transport accounting for advection and diffusion. The pore space ... Under variably saturated conditions the area of interfaces changes with degree of the fluid saturation ... PoreFlow uses complex formulations for more accurate modeling of transport problems in presence ... variably saturated conditions, to demonstrate the model applicability in hydrogeology problems and petroleum fields...

iEBEVISHNU
 Referenced in 3 articles
[sw22369]
 modeldata comparisons through large scale MonteCarlo simulations. A numerical interface between the hydrodynamically ... thermal photon radiation is also discussed. This interface is more generally designed for calculations ... energy loss and heavy quark diffusion...

NDlib
 Referenced in 1 article
[sw23560]
 NDlib: a Python Library to Model and Analyze Diffusion Processes Over Complex Networks. Nowadays ... namely NDlib, an environment designed to describe diffusion simulations. NDlib is designed ... online visualization tool that abstracts its programmatic interface and makes available the simulation platform...

Morpheus
 Referenced in 0 articles
[sw34557]
 equations and reactiondiffusion systems. It allows rapid development of multiscale models in biological terms ... rather than programming code. Its graphical user interface supports the entire workflow from model construction...

NTMpy
 Referenced in 1 article
[sw31845]
 combined and optimized to solve coupled heat diffusion equations in one dimension, on arbitrary piecewise ... threetemperature model. The energy source deposited in the material is modelled as a light ... realistic light absorption in presence of scattering interfaces as in multilayer samples. The open source...

reactingfoamSCI
 Referenced in 1 article
[sw29520]
 stiff chemistry and the oversimplified mixture transport models, etc. In this work, an OpenFOAM ... stiff ODE solver with error control. An interface between OpenFOAM 5.0 and the open source ... numerical calculation results, including those from a diffusionconvection problem, homogeneous ignition delay, shock tube...

BEMLIB
 Referenced in 101 articles
[sw00005]
 BEMLIB is a boundaryelement software library of...

ADOLC
 Referenced in 242 articles
[sw00019]
 ADOLC: Automatic Differentiation of C/C++. We present...

ALBERT
 Referenced in 82 articles
[sw00025]
 ALBERT  Software for scientific computations and applications. Adaptive...

ANSYS
 Referenced in 663 articles
[sw00044]
 ANSYS offers a comprehensive software suite that spans...

ARMS
 Referenced in 64 articles
[sw00048]
 ARMS: an algebraic recursive multilevel solver for general...

BoomerAMG
 Referenced in 168 articles
[sw00086]
 BoomerAMG: A parallel algebraic multigrid solver and preconditioner...

CGAL
 Referenced in 362 articles
[sw00118]
 The goal of the CGAL Open Source Project...