• KELLER

  • Referenced in 4 articles [sw22600]
  • genes. MOTIVATION: Gene regulatory networks underlying temporal processes, such as the cell cycle ... genes involved in the developmental process during the life cycle of Drosophila melanogaster. Our results ... living organism during its full developmental course. Our results also show that many genes exhibit...
  • VirtualLeaf

  • Referenced in 4 articles [sw28766]
  • abstractions for building biological simulations of developmental processes. We present a step-by-step introduction ... plant researchers to analyze the function of developmental genes in the context of the biophysics...
  • ESTIMA

  • Referenced in 15 articles [sw00249]
  • availability of user friendly pre- and post-processing graphical tools to rapidly determine the model ... proven developmental environment to researchers and engineers to accelerate efficient model development process. This paper...
  • EmbryoMaker

  • Referenced in 2 articles [sw38801]
  • allows the user to simulate custom developmental processes by designing custom gene networks capable...
  • iMRM

  • Referenced in 1 article [sw40034]
  • series of cellular and developmental processes. Knowledge about the distributions of RNA modifications...
  • PSNO

  • Referenced in 6 articles [sw27678]
  • post-translational modifications involved in many biological processes. Malfunction or dysregulation of SNO leads ... series of severe diseases, such as developmental abnormalities and various diseases. Therefore, the identification...
  • ZFIQ

  • Referenced in 1 article [sw30480]
  • increasingly important vertebrate system for developmental biology, functional genomics, disease modeling and drug discovery. Zebrafish ... software provides streamlined data processing and analysis capability for developmental biology and disease modeling using...
  • Sincera

  • Referenced in 2 articles [sw23915]
  • Profiling Analysis. A major challenge in developmental biology is to understand the genetic and cellular ... understand cellular heterogeneity in complex biological systems, processing large amounts of RNA-seq data from...
  • BVPy

  • Referenced in 1 article [sw37710]
  • writing. Initially built in the context of developmental biology and morphomechanics, its purpose ... relevant structures, inspired by biophysical and biochemical processes (morphogene patterning, active matter mechanics, active transports...
  • R

  • Referenced in 10196 articles [sw00771]
  • R is a language and environment for statistical...
  • RKC

  • Referenced in 126 articles [sw00808]
  • RKC: An explicit solver for parabolic PDEs. An...
  • RADAU

  • Referenced in 81 articles [sw01118]
  • RADAU5 implicit Runge-Kutta method of order 5...
  • PETSc

  • Referenced in 1594 articles [sw04012]
  • The Portable, Extensible Toolkit for Scientific Computation (PETSc...
  • Trilinos

  • Referenced in 412 articles [sw04028]
  • Each Trilinos package is a self-contained, independent...
  • CoArray

  • Referenced in 32 articles [sw04083]
  • Coarrays are an exciting parallel programming extension for...
  • Ipopt

  • Referenced in 787 articles [sw04808]
  • Ipopt (Interior Point OPTimizer, pronounced eye-pea-Opt...
  • XPPAUT

  • Referenced in 464 articles [sw05543]
  • XPPAUT is software for the analysis and simulation...
  • Overture

  • Referenced in 42 articles [sw05685]
  • Overture is an object-oriented code framework for...
  • SAS

  • Referenced in 1580 articles [sw06377]
  • SAS (Statistical Analysis System) is an integrated system...