• COUNT

  • Referenced in 61 articles [sw26562]
  • COUNT: Functions, Data and Code for Count Data. Functions, data and code for Hilbe ... Press) and Hilbe, J.M. 2014. Modeling Count Data (Cambridge University Press...
  • edgeR

  • Referenced in 53 articles [sw06936]
  • functional genomics applications. One of the fundamental data analysis tasks, especially for gene expression studies ... involves determining whether there is evidence that counts for a transcript or exon are significantly ... examining differential expression of replicated count data. An overdispersed Poisson model is used to account ... sequencing data, such as proteome peptide count data...
  • DEseq

  • Referenced in 60 articles [sw10344]
  • distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test...
  • Mplus

  • Referenced in 346 articles [sw06511]
  • with either observed or unobserved heterogeneity, and data that contain missing values. Analyses ... binary, ordered categorical (ordinal), unordered categorical (nominal), counts, or combinations of these variable types ... capabilities for Monte Carlo simulation studies, where data can be generated and analyzed according...
  • BayesLogit

  • Referenced in 46 articles [sw09312]
  • Gamma latent variables. We propose a new data-augmentation strategy for fully Bayesian inference ... effect models, and spatial models for count data. In each case, our data-augmentation strategy...
  • DCL

  • Referenced in 30 articles [sw11087]
  • adding the information of reported count data to a classical triangle of reserving data...
  • DESeq2

  • Referenced in 27 articles [sw41938]
  • distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test...
  • pscl

  • Referenced in 25 articles [sw07110]
  • zero-inflated and hurdle models for count data; goodness-of-fit measures for GLMs; data...
  • BaySeq

  • Referenced in 17 articles [sw10343]
  • patterns of differential expression in count data. Results: We propose a framework for defining patterns...
  • GWRM

  • Referenced in 11 articles [sw11197]
  • generalized Waring regression model for count data. A regression model for count data based...
  • MortalitySmooth

  • Referenced in 14 articles [sw10483]
  • package provides a framework for smoothing count data in both one- and two-dimensional settings...
  • addreg

  • Referenced in 21 articles [sw12107]
  • take both right censored and counting process data...
  • Surveillance

  • Referenced in 33 articles [sw00932]
  • epidemic phenomena. This includes count, binary and categorical data time series as well as continuous...
  • DCluster

  • Referenced in 10 articles [sw08594]
  • spatial clusters of disease using count data. Bootstrap is used to estimate sampling distributions...
  • LogXact

  • Referenced in 16 articles [sw12105]
  • including continuous and binary, polytonomous, count, and missing data. Users of the software...
  • glmmML

  • Referenced in 9 articles [sw07509]
  • Generalized linear models with clustered data: fixed and random effects models The statistical analysis ... mixed effects models for binary and count data is investigated. In the statistical computing environment...
  • Proc Traj

  • Referenced in 14 articles [sw11097]
  • longitudinal data. Applications to psychometric scale data, offense counts, and a dichotomous prevalence measure...
  • qcc

  • Referenced in 8 articles [sw11593]
  • control charts for continuous, attribute and count data. Cusum and EWMA charts. Operating characteristic curves...
  • QuasiSeq

  • Referenced in 7 articles [sw11359]
  • differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial...
  • svaseq

  • Referenced in 5 articles [sw14010]
  • singular vectors of the subset of the data matrix. The resulting estimates of artifacts ... approach specifically created for count data or FPKMs from sequencing experiments based on appropriate data ... batch effect estimation on simulated data, real count-based data and FPKM-based data. These...