• ALBERTA

  • Referenced in 170 articles [sw01061]
  • Adaptive multiLevel finite element toolbox using Bisectioning refinement and Error control by Residual Techniques ... distributed memory parallel computers including PC clusters...
  • SA-cluster

  • Referenced in 8 articles [sw06867]
  • graph vertices. As part of the clustering refinement, the graph edge weights are iteratively adjusted ... repeated in each iteration of the clustering process to recalculate the random walk distances which...
  • ScaLAPACK

  • Referenced in 403 articles [sw00830]
  • systems of equations, condition estimation and iterative refinement, for LU and Cholesky factorization, matrix inversion ... Intel series, TM CM-5, clusters of workstations, and any system for which...
  • Inc-cluster

  • Referenced in 4 articles [sw06866]
  • graph vertices. As part of the clustering refinement, the graph edge weights are iteratively adjusted ... repeated in each iteration of the clustering process to recalculate the random walk distances which...
  • AnyDBC

  • Referenced in 1 article [sw29968]
  • most promising objects for refining clusters at each iteration. Thus, in the end, it performs...
  • IntraClusTSP

  • Referenced in 1 article [sw30946]
  • IntraClusTSP - an incremental intra-cluster refinement heuristic algorithm for symmetric travelling salesman problem...
  • Pyramid

  • Referenced in 7 articles [sw13161]
  • automatic adaptive refinement of large unstructured meshes on parallel computers and clusters. This software library...
  • HyperStar

  • Referenced in 6 articles [sw08534]
  • describe simple cluster-based fitting, a new graphical method for refining the density approximation...
  • scalpel

  • Referenced in 2 articles [sw19378]
  • candidate neurons. Next, we refine the dictionary using clustering. Finally, we apply the dictionary...
  • hierGWAS

  • Referenced in 1 article [sw33150]
  • provides an automatic, data-driven refinement of the SNP clusters to smaller groups or single...
  • AGRIF

  • Referenced in 5 articles [sw07841]
  • package for the integration of adaptive mesh refinement (AMR) features within existing finite difference codes ... process: time integration of grid hierarchy, clustering, interpolations, updates, etc. The package then creates...
  • OrthoDB

  • Referenced in 4 articles [sw22979]
  • orthologs and the underlying free software. Orthology, refining the concept of homology, is the cornerstone ... comes with the freely available underlying ortholog clustering pipeline (http://www.orthodb.org/software)....
  • SCLaP

  • Referenced in 1 article [sw20060]
  • clustered) complex networks via size-constrained graph clustering. The most commonly used method to tackle ... instantiate both the coarsening phase and the refinement phase of multilevel graph partitioning. We mainly ... target networks with highly irregular and hierarchically clustered structure (but other network types...
  • Algorithm 872

  • Referenced in 5 articles [sw12991]
  • Parallel 2D constrained Delaunay mesh generation. Delaunay refinement is a widely used method ... exhibits low communication costs. On a heterogeneous cluster of more than 100 processors our implementation...
  • EasyCluster2

  • Referenced in 1 article [sw28774]
  • ESTs and full-length transcripts. The clustering procedure is enhanced with the employment of genome ... detection of splicing isoforms, since it can refine exon-exon junctions and explore alternative splicing ... powerful tool to generate reliable clusters for gene expression studies, facilitating the analysis also...
  • Dendro

  • Referenced in 7 articles [sw29068]
  • module, and a module for adaptive mesh refinement (AMR). Here, we focus on the multigrid ... system (ldquoAberdquo), and the Sun Constellation Linux cluster (ldquoRangerrdquo...
  • EDISA

  • Referenced in 2 articles [sw30026]
  • Dimension Iterative Signature Algorithm), a novel probabilistic clustering approach for 3D gene-condition-time datasets ... modules from the dataset which are then refined by removing genes and conditions until they...
  • METAREP

  • Referenced in 1 article [sw35199]
  • logical combinations of fields to filter and refine datasets. Users can compare multiple datasets ... applying statistical tests as well as hierarchical clustering, multidimensional scaling and heatmaps. For each...
  • Fastplace

  • Referenced in 1 article [sw13203]
  • placement framework, by incorporating a two-level clustering scheme within the flat analytical placer FastPlace ... efficient and improved iterative local refinement technique that can handle placement blockages and placement congestion...
  • NuscaS

  • Referenced in 2 articles [sw09857]
  • distributed-memory parallel computers such as PC-clusters. For solving sparse systems of equations, NuscaS ... longest-edge partition is used as a refinement mesh algorithm. In this paper...