• strucchange

  • Referenced in 61 articles [sw07118]
  • data online using fluctuation processes. Finally, the breakpoints in regression models with structural changes...
  • ExSpect

  • Referenced in 11 articles [sw04390]
  • either step-by-step, continuous or with breakpoints. An ExSpect simulation can create...
  • Segmented

  • Referenced in 11 articles [sw08128]
  • more segmented relationships. Several variables with multiple breakpoints are allowed...
  • TeaBag

  • Referenced in 6 articles [sw08980]
  • toggle eager evaluation, and to set breakpoints on both functions and terms. We briefly describe...
  • TTAnalyze

  • Referenced in 6 articles [sw18511]
  • executes (e.g., through API call hooking or breakpoints), making it more difficult to detect...
  • VIDA

  • Referenced in 4 articles [sw39992]
  • manual debugging, developers have difficulty in choosing breakpoints. To address these problems and help developers ... statement is executed before the checking point (breakpoint) may make the debugging process fail...
  • jpHMM

  • Referenced in 4 articles [sw10925]
  • genomes. For a query sequence phylogenetic recombination breakpoints are predicted and each region...
  • ReadDepth

  • Referenced in 4 articles [sw17969]
  • obtained from low-coverage experiments by utilizing breakpoint information from paired end sequencing...
  • CATBox

  • Referenced in 4 articles [sw18663]
  • executed. He or she can set breakpoints, proceed in single steps and trace into subroutines...
  • Pindel

  • Referenced in 4 articles [sw33143]
  • Pindel, a pattern growth approach, to detect breakpoints of large deletions and medium-sized insertions...
  • SeqBBS

  • Referenced in 2 articles [sw17972]
  • illustrate that a change-point (or a breakpoint) detection method, along with a Bayesian approach ... friendly R-package, SeqBBS (stands for Bayesian breakpoints search for sequencing data) and applied ... matched normal cell line BL1954. Breakpoints that separate different CNV regions are successfully identified...
  • SegAnnDB

  • Referenced in 2 articles [sw19542]
  • characterize regions of chromosome gains, losses and breakpoints in tumor genomes. Although many models have ... alongside known genes. Availability and implementation: The breakpoints project on INRIA GForge hosts the source...
  • YAHA

  • Referenced in 1 article [sw33144]
  • Flexible Long-Read Alignment With Optimal Breakpoint Detection. Motivation: With improved short-read assembly algorithms ... cover a query using a biologically relevant breakpoint penalty. YAHA can also report multiple mappings ... query. We show that YAHA detects more breakpoints in less time than BWA-SW across ... especially excels at complex SVs comprising multiple breakpoints...
  • BPGen

  • Referenced in 2 articles [sw18496]
  • BPGen: an automated breakpoint generator for debugging...
  • RDP2

  • Referenced in 2 articles [sw23041]
  • attempts to identify recombinant sequences and recombination breakpoints using 10 published recombination detection methods, including...
  • FULLDOC

  • Referenced in 1 article [sw02232]
  • expected values of source variables at breakpoints. par In this paper, we present FULLDOC ... reporting. FULLDOC can report expected values at breakpoints when reportability is affected because values have...
  • TOPALi

  • Referenced in 1 article [sw30327]
  • statistical methods to predict the positions of breakpoints due to past recombination. The breakpoint predictions...
  • SEGMENTD

  • Referenced in 1 article [sw31545]
  • some kinds of large manipulations where symbolic breakpoints and range limits are used. Some years ... especially for large scale use of symbolic breakpoints, or knots, for the functions. This package...
  • Strucchangean

  • Referenced in 1 article [sw14246]
  • data online using fluctuation processes. Finally, the breakpoints in regression models with structural changes...
  • AMGKQ

  • Referenced in 1 article [sw27197]
  • singularities are addressed through the use of breakpoints. Its accuracy performance is investigated thoroughly...