• bootlib

  • Referenced in 461 articles [sw40642]
  • broad and up-to-date coverage of bootstrap methods with numerous applied examples, together with ... describes various semiparametric versions of the likelihood function and the ideas underlying which are closely...
  • PhyML

  • Referenced in 11 articles [sw10915]
  • PhyML is a software that estimates maximum likelihood phylogenies from alignments of nucleotide or amino ... statistical framework (the non-parametric bootstrap and the approximate likelihood ratio test). (http://packages.ubuntu.com/lucid/science/phyml)...
  • lplb

  • Referenced in 2 articles [sw31428]
  • package lplb: Local partial likelihood bootstrap. ”lplb” is a R package for multivariate covariates-biomarker...
  • SEAVIEW

  • Referenced in 4 articles [sw22985]
  • distance estimates, maximum parsimony, maximum likelihood), and a bootstrap analysis with any of them. Reconstructed...
  • PHYLO_WIN

  • Referenced in 4 articles [sw22986]
  • distance estimates, maximum parsimony, maximum likelihood), and a bootstrap analysis with any of them. Reconstructed...
  • boottest

  • Referenced in 5 articles [sw37419]
  • inference in Stata using boottest. The wild bootstrap was originally developed for regression models with ... likelihood and to ones where the error terms are (perhaps multiway) clustered. Like bootstrap methods ... perform a wide variety of wild bootstrap tests, often at remarkable speed. It can also ... maximum likelihood. Although it is designed to perform the wild cluster bootstrap, boottest can also...
  • mixR

  • Referenced in 1 article [sw40945]
  • Binned Data. Performs maximum likelihood estimation for finite mixture models for families including Normal, Weibull ... selection by using information criteria or bootstrap likelihood ratio test. The data used for mixture...
  • fitdistrplus

  • Referenced in 32 articles [sw15776]
  • data) and allowing different estimation methods (maximum likelihood, moment matching, quantile matching and maximum goodness ... same data set and can handle to bootstrap parameter estimates. Detailed examples are given...
  • PsN-Toolkit

  • Referenced in 2 articles [sw16112]
  • NONMEM (PsN). Five methods: the Bootstrap, the Jackknife, Log-likelihood Profiling, Case-deletion Diagnostics ... easier to use the Bootstrap, the Jackknife, Log-likelihood Profiling, Case-deletion Diagnostics and Stepwise...
  • curstatCI

  • Referenced in 3 articles [sw27874]
  • likelihood estimator, the smoothed maximum likelihood estimator and pointwise bootstrap confidence intervals for the distribution...
  • afex

  • Referenced in 4 articles [sw20405]
  • freedom (LMM only), parametric bootstrap (LMMs and GLMMs), or likelihood ratio tests (LMMs and GLMMs...
  • btergm

  • Referenced in 4 articles [sw24452]
  • pseudolikelihood with bootstrapped confidence intervals or Markov Chain Monte Carlo maximum likelihood. Goodness...
  • glmmML

  • Referenced in 9 articles [sw07509]
  • intercepts are distinct fixed parameters; moreover, a bootstrapping technique is implemented to replace asymptotic analysis ... intercepts model is fitted using a maximum likelihood estimator with adaptive Gauss-Hermite and Laplace...
  • UFBoot2

  • Referenced in 1 article [sw29593]
  • used in maximum likelihood phylogenetic analyses. We recently proposed the ultrafast bootstrap approximation (UFBoot...
  • vccp

  • Referenced in 1 article [sw42775]
  • change points, and a likelihood ratio test or the stationary bootstrap for inference. The vine...
  • iZID

  • Referenced in 2 articles [sw32719]
  • bootstrapped Monte Carlo estimate of p value of Kolmogorov-Smirnov (KS) test and likelihood ratio...
  • bccp

  • Referenced in 1 article [sw42048]
  • following tasks. Simulating, computing maximum likelihood estimator, computing the Fisher information matrix, computing goodness ... /j.2517-6161.1968.tb00724.x> and bootstrap method for computing the bias-corrected maximum likelihood estimator...
  • MULTIRA

  • Referenced in 2 articles [sw11285]
  • Model; Joint maximum Likelihood and conditional Maximum Likelihood Estimation; Modelfit measures including; Martin Loef Test ... Item Homogeneity; Residual Mean Square Item Fit; Bootstrap GoF; MKAT Algorithm by J. Rost...
  • MultiPhyl

  • Referenced in 3 articles [sw29738]
  • number of algorithmic improvements in maximum-likelihood-based tree search methods. However, it can still ... such as model selection, tree searching and bootstrapping of each of the alignments using many ... amino acid models and 56 nucleotide maximum likelihood models and a variety of statistical methods...
  • C2

  • Referenced in 1 article [sw41653]
  • maximum likelihood regression and calibration (ML), all with leave-one-out, bootstrap or n-fold...