• NIRVANA

  • Referenced in 33 articles [sw01044]
  • multi-scale problems and implements a Poisson solver to treat self-gravitational flows...
  • TABI

  • Referenced in 32 articles [sw18194]
  • treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules. We present ... integral (TABI) solver for electrostatics of solvated biomolecules described by the linear Poisson-Boltzmann equation ... faces in the triangulation. The TABI solver is applied to compute the electrostatic solvation energy ... memory usage, and compare results for the Poisson-Boltzmann and Poisson equations. We show that...
  • WENO

  • Referenced in 54 articles [sw12694]
  • WENO-solver for the transients of Boltzmann-Poisson system for semiconductor devices: Performance and comparisons ... difference WENO solver to the solution of the 1-D Boltzmann-Poisson system for semiconductor ... formulate the Boltzmann-Poisson system in a spherical coordinate system using the energy ... evaluations of the collision terms. The solver is accurate in time hence potentially useful...
  • AFMPB

  • Referenced in 12 articles [sw08875]
  • AFMPB: an adaptive fast multipole Poisson-Boltzmann solver for calculating electrostatics in biomolecular systems ... described an adaptive fast multipole Poisson-Boltzmann solver for computing the electrostatics in biomolecules. This ... solver combines the fast multipole method with the Krylov subspace methods, which are applied ... conditioned boundary integral equation of the linearized Poisson-Boltzmann equation. Numerical experiments show the efficiency...
  • PoisFFT

  • Referenced in 7 articles [sw28040]
  • PoisFFT - a free parallel fast Poisson solver. A fast Poisson solver software package PoisFFT ... fast Fourier transform to directly solve the Poisson equation on a uniform orthogonal grid ... mathematical methods for the fast Poisson solver and discusses the software implementation and parallelization...
  • GAMER

  • Referenced in 11 articles [sw10937]
  • variety of GPU-accelerated hydrodynamic and Poisson solvers; Hybrid OpenMP/MPI/GPU parallelization; Concurrent CPU/GPU execution...
  • PTRACK

  • Referenced in 4 articles [sw10229]
  • parallel 3D Poisson solver for space charge simulation in cylindrical coordinates. This paper presents ... development of a parallel three-dimensional Poisson solver in cylindrical coordinate system for the electrostatic ... beam in a circular tube. The Poisson solver uses Fourier expansions in the longitudinal ... accelerator line, using the Poisson solver in a Cartesian coordinate system and a Cylindrical coordinate...
  • sldg

  • Referenced in 8 articles [sw17637]
  • scaling of a two dimensional Vlasov-Poisson solver that is implemented using the framework provided...
  • AFiD_GPU

  • Referenced in 7 articles [sw24939]
  • clusters. The AFiD code, an open source solver for the incompressible Navier–Stokes equations ... improve the scaling of the Poisson solver, which is the main bottleneck of incompressible solvers...
  • IETI

  • Referenced in 68 articles [sw19412]
  • Interconnecting (IETI) method, which combines the advanced solver design of FETI with the exact geometry ... classes of simple model problems (Poisson and linearized elasticity) and discuss the coupling ... suitable preconditioner for the iterative linear solver used for the interface problem. We report several...
  • MLAPM

  • Referenced in 5 articles [sw18063]
  • ability of the code’s Poisson solver to recover the gravitational fields of both virialized...
  • DelPhi

  • Referenced in 8 articles [sw42005]
  • comprehensive suite for the well-known Poisson-Boltzmann solver, DelPhi, enriched with additional features...
  • MRAG-I2D

  • Referenced in 11 articles [sw18266]
  • local time-stepping. The multiresolution solver of the Poisson equation relies on the development ... better accuracy than state-of-the-art solvers while it exhibits unprecedented performance in terms...
  • FLUPS

  • Referenced in 3 articles [sw38050]
  • Fourier-based library of unbounded Poisson solvers. A Fourier-based library of unbounded Poisson solvers ... fully unbounded boundary conditions for the Poisson equation on rectangular domains with uniform resolution. FLUPS...
  • SMPBS

  • Referenced in 5 articles [sw23654]
  • SMPBS (Size Modified Poisson-Boltzmann Solvers) is a library of size modified Poisson-Boltzmann equation ... SMPBE) solvers that incorporates finite element, finite difference, solution decomposition, domain decomposition, and multigrid techniques ... SDPBS web server, uses the classic Poisson-Boltzmann model...
  • FREEFLOW

  • Referenced in 23 articles [sw04253]
  • conjugate gradient solver is used to invert the discrete Poisson equation. An accurate approximation...
  • hieLPS

  • Referenced in 2 articles [sw16823]
  • method, termed as hierarchical Loop basis Poisson Solver (hieLPS), extends previous Poisson solver through loop...
  • PBEQ-Solver

  • Referenced in 15 articles [sw17203]
  • Poisson-Boltzmann (PB) equations and interactively visualize the electrostatic potential. PBEQ-Solver calculates (i) electrostatic...
  • MIBPB

  • Referenced in 58 articles [sw08106]
  • software package for electrostatic analysis. The Poisson–Boltzmann equation (PBE) is an established model ... based PBE software package, the MIBPB solver, for electrostatic analysis. The MIBPB has a unique...
  • FDMRP

  • Referenced in 3 articles [sw10764]
  • Matlab-based finite-difference solver for the Poisson problem with mixed Dirichlet-Neumann boundary conditions ... Matlab-based finite-difference numerical solver for the Poisson equation for a rectangle ... domain in three dimensions, is presented. The solver is optimized for handling an arbitrary combination...