R package FLightR: A Package for Reconstructing Animal Paths from Solar Geolocation Loggers. Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015)<doi:10.1186/s40462-015-0062-5>, general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017)<doi:10.1111/2041-210X.12765> and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016)<doi:10.1111/jav.00891>.
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- Rocio Joo, Matthew E. Boone, Thomas A. Clay, Samantha C. Patrick, Susana Clusella-Trullas, Mathieu Basille: Navigating through the R packages for movement (2019) arXiv