R package rehh. Functions for the detection of footprints of selection on dense SNP data using Extended Homozygosity Haplotype (EHH) based tests. The package includes computation of EHH, iHS (within population) and Rsb or XP-EHH (across pairs of populations) statistics. Various plotting functions are also included to facilitate visualization and interpretation of the results.
Keywords for this software
References in zbMATH (referenced in 2 articles )
Showing results 1 to 2 of 2.
- Clare Horscroft, Reuben J Pengelly, Timothy J Sluckin, Andrew Collins: zalpha: an R package for the identification of regions of the genome under selection (2020) not zbMATH
- Gondro, Cedric: Primer to analysis of genomic data using R (2015)