• Chombo

  • Referenced in 51 articles [sw04316]
  • equations on block-structured adaptively refined rectangular grids. Both elliptic and time-dependent modules ... geometries with both embedded boundaries and mapped grids, and Chombo also supports particle methods. Most...
  • Ogen

  • Referenced in 23 articles [sw18283]
  • first generate Mappings to describe the geometry (a set of overlapping grids whose union covers...
  • libQEx

  • Referenced in 2 articles [sw12780]
  • robust quad mesh extraction from Integer-Grid Maps with imperfections. Integer-Grid Maps are what...
  • Interface_Euler_AMR

  • Referenced in 3 articles [sw20491]
  • incompressible media. In addition, it implements mapped grids to model more complex interface geometry...
  • Anya

  • Referenced in 2 articles [sw31694]
  • pair of points on a grid map such that the path is not artificially constrained...
  • Satin

  • Referenced in 4 articles [sw08972]
  • divide-and-conquer model maps cleanly to grid systems, which also tend to have...
  • MENUS-PGG

  • Referenced in 3 articles [sw02138]
  • MENUS-PGG: A mapping environment for unstructured and structured numerical parallel grid generation. MENUS ... generate structured and unstructured static and adaptive grids (or meshes) required for the implementation ... based on the data mapping of sequentially generated grids and support only the data parallel ... present preliminary results indicating that the parallel grid generation results in a substandard reduction...
  • QEx

  • Referenced in 1 article [sw12779]
  • strive to generate an integer-grid map, i.e. a parametrization of the input surface into ... canonical grid of integer iso-lines forms a quad mesh when mapped back onto...
  • TRACE

  • Referenced in 2 articles [sw06654]
  • This paper presents a method of mapping spatial grid nodes to processors that combines...
  • PHAST

  • Referenced in 2 articles [sw11517]
  • defined in a combination of map and grid coordinate systems, independent of a specific model...
  • BatchJobs

  • Referenced in 12 articles [sw15388]
  • package BatchJobs: Batch Computing with R. Provides Map, Reduce and Filter variants to generate jobs ... systems like PBS/Torque, LSF, SLURM and Sun Grid Engine. Multicore and SSH systems are also...
  • rworldmap

  • Referenced in 3 articles [sw23536]
  • Mapping Global Data. Enables mapping of country level and gridded user datasets...
  • MAESTRO

  • Referenced in 9 articles [sw11176]
  • primary difference between MAESTRO and other structured grid AMR approaches for incompressible and low Mach ... novel mapping technique between the one-dimensional base state and the Cartesian grid, as well...
  • FastGrid

  • Referenced in 0 articles [sw24585]
  • FastGrid - the accelerated AutoGrid potential maps generation for molecular docking. The AutoDock suite is widely ... programs -- AutoGrid for precomputation of potential grid maps and AutoDock for docking into potential grid ... this paper, the acceleration of potential maps generation based on AutoGrid and its implementation called ... quite common molecules and sufficiently large grids...
  • AutoGrid

  • Referenced in 0 articles [sw24586]
  • program that pre-calculates grid maps of interaction energies for various atom types, such ... protein, DNA or RNA. These grid maps are then used by AutoDock docking calculations...
  • M_Map

  • Referenced in 1 article [sw14991]
  • different spherical projections (and determine inverse mappings); A grid generation routine to make nice axes...
  • PREP-CHEM-SRC

  • Referenced in 1 article [sw29080]
  • fields interpolated onto the transport model grid. Several map projections can be chosen. The inclusion...
  • MRAG-I2D

  • Referenced in 6 articles [sw18266]
  • MRAG-I2D: multi-resolution adapted grids for remeshed vortex methods on multicore architectures. We present ... strategies to map efficiently the irregular computational workload of wavelet-adapted grids on multicore nodes...
  • LDheatmap

  • Referenced in 2 articles [sw30542]
  • produces a graphical display, as a heat map, of pairwise linkage disequilibrium measurements between single ... within a genomic region. LDheatmap() uses the grid graphics system, an alternative to the traditional ... tools from the grid package to modify heat maps are illustrated by examples...
  • CPIC

  • Referenced in 4 articles [sw18104]
  • method, coupled with an adaptive computational grid that can conform to arbitrarily shaped domains. CPIC ... map is introduced between the physical space and the logical space, where the grid...