
MCELL
 Referenced in 23 articles
[sw06121]
 Carlo algorithms to track the stochastic behavior of discrete molecules in space and time...

KELLEY
 Referenced in 600 articles
[sw04829]
 using the parameter identification problem and the discretized optimal control problem introduced in chapter ... that are later used to demonstrate the behavior of optimization algorithms. Chapter 7 introduces implicit...

MinRes
 Referenced in 30 articles
[sw09350]
 multiharmonic approach to the optimality system and discretize in space by means of a symmetrically ... method, taking care of the different physical behavior in conducting and nonconducting subdomains, respectively ... robust with respect to the space discretization and time discretization parameters as well ... analyze the asymptotic behavior of the error in terms of the discretization parameters...

COPASI
 Referenced in 62 articles
[sw12253]
 simulate their behavior using ODEs or Gillespie’s stochastic simulation algorithm; arbitrary discrete events...

GOLOG
 Referenced in 170 articles
[sw02159]
 action before committing to a particular behavior. The net effect is that programs ... robots and industrial processes, intelligent software agents, discrete event simulation, etc. It is based...

plfit
 Referenced in 222 articles
[sw23186]
 program fits powerlaw distributions to empirical (discrete or continuous) data, according to the method ... identifying the range over which powerlaw behavior holds. Commonly used methods for analyzing power...

Nike2D
 Referenced in 60 articles
[sw12115]
 viscoelastic material models are implemented. Nearly incompressible behavior that arises in plasticity problems and elasticity ... node elements are used for the spatial discretization, and profile (bandwidth) minimization is optional...

SMART_
 Referenced in 33 articles
[sw04097]
 study of stochastic and timing behavior, both sparsestorage and Kronecker numerical solution approaches ... process is a Markov chain. In addition, discreteevent simulation is always applicable regardless...

Möbius
 Referenced in 24 articles
[sw04098]
 software tool for modeling the behavior of complex systems. Although it was originally developed ... used for a broad range of discreteevent systems, from biochemical reactions within genes...

CompuCell3D
 Referenced in 17 articles
[sw34248]
 behaviors. We show how to develop such a simulation, based on the hybrid (continuumdiscrete...

Stabhyli
 Referenced in 5 articles
[sw20122]
 systems that exhibit discrete as well as continuous behavior. The stability property basically ensures that ... instance in control applications where a discrete controller is controlling a timecontinuous process such...

Zelus
 Referenced in 4 articles
[sw20166]
 modeling systems that mix discrete logical time and continuous time behaviors. From a user ... system and causality analysis ensure that all discrete changes are aligned with zerocrossing events...

MOVCOL4
 Referenced in 17 articles
[sw03307]
 collocation. The scheme is shown to enforce discrete conservation for problems written in a generalized ... thinfilm  type equations exhibiting metastable behavior, finitetime solution blowup, finitetime extinction...

PFC2D
 Referenced in 16 articles
[sw07902]
 field where the interaction of many discrete objects exhibiting largestrain and/or fracturing is required ... analysis that examines the dynamic behavior of a particulate system. Highlighted Features: Dynamic motion...

MrDIRECT
 Referenced in 8 articles
[sw12380]
 high degree of accuracy. This behavior of DIRECT is similar to the “smooth mode phenomenon ... encountered when solving linear systems discretized from partial differential equation (PDE). In the case...

momentuHMM
 Referenced in 8 articles
[sw21676]
 generalized hidden Markov models of animal movement. Discretetime hidden Markov models (HMMs) have become ... immensely popular tool for inferring latent animal behaviors from telemetry data. Here we introduce...

HyRG
 Referenced in 0 articles
[sw20152]
 generating hybrid automata with diverse and interesting behaviors, as there are an uncountable number ... points. We partition the components describing discrete behavior (guards, assignments, and invariants) to allow either...

Supremica
 Referenced in 15 articles
[sw18546]
 Supremica, for verification, synthesis and simulation of discrete event systems is presented. The basic model ... possible to generate code that implements the behavior of the model using both...

WebSPN
 Referenced in 2 articles
[sw14798]
 provides a discrete time approximation of the stochastic behavior of the marking process which results...

CellExcite
 Referenced in 2 articles
[sw35366]
 efficiently capture both discrete and continuous excitablecell behavior. Conclusions: The CellExcite simulation framework...