
spatstat
 Referenced in 88 articles
[sw04429]
 empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with ... crossvalidated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics etc. Point process...

PMA
 Referenced in 65 articles
[sw19126]
 sparse principal components analysis, and sparse canonical correlation analysis, described in the following papers ... applications to sparse principal components and canonical correlation analysis. Biostatistics ... Tibshirani (2009) Extensions of sparse canonical correlation analysis, with applications to genomic data. Statistical Applications...

rms
 Referenced in 65 articles
[sw04532]
 generalized least squares for serially or spatially correlated observations, generalized linear models, and quantile regression...

MIXED
 Referenced in 56 articles
[sw06480]
 repeated in time, space or both. Correlation among measurements made on the same subject...

RICPAC
 Referenced in 53 articles
[sw15253]
 with respect to inversion. Crossweighting or correlated noise is handled directly. Both systemtheoretic...

CATHARE
 Referenced in 34 articles
[sw09025]
 analysed. Having regard for some development principles, correlations are established on the basis of experimental ... laws are then developed. Wall heat transfer correlations then have to be fixed. All these...

OSCAR
 Referenced in 29 articles
[sw03026]
 large number of predictors with possibly high correlations, such as gene expression data. In this ... yields exact equality of some coefficients, encouraging correlated predictors that have a similar effect...

geepack
 Referenced in 29 articles
[sw07119]
 solver for parameters in mean, scale, and correlation structures, through mean link, scale link ... correlation link. Can also handle clustered categorical responses...

QSDP
 Referenced in 38 articles
[sw04726]
 software on QSDPs arising from the nearest correlation matrix and the Euclidean distance matrix completion...

fdrtool
 Referenced in 23 articles
[sw08196]
 null models (pvalues, zscores, correlation coefficients, tscores). The proportion of null values ... majorant (LCM), for the halfnormal and correlation distributions, and for computing empirical higher criticism...

corpor
 Referenced in 17 articles
[sw09381]
 corpcor: Efficient Estimation of Covariance and (Partial) Correlation. This package implements a JamesSteintype ... matrix, with separate shrinkage for variances and correlations. The details of the method are explained ... package also provides shrinkage estimators for partial correlations and partial variances. The inverse ... covariance and correlation matrix can be efficiently computed, as well as any arbitrary power...

frailtypack
 Referenced in 31 articles
[sw06070]
 models for proportional hazard models with two correlated random effects (intercept random effect with random...

GAMESS
 Referenced in 29 articles
[sw03002]
 from RHF, ROHF, UHF, GVB, and MCSCF. Correlation corrections to these SCF wavefunctions include Configuration...

SFSDP
 Referenced in 29 articles
[sw04793]
 FSDP, SFSDP exploits the aggregated and correlative sparsity of a sensor network localization problem...

Herwig++
 Referenced in 27 articles
[sw10350]
 using matrix elements, where possible including spin correlations and offshell effects...

MOLPRO
 Referenced in 16 articles
[sw06125]
 computations, with extensive treatment of the electron correlation problem through the multiconfigurationreference CI, coupled ... associated methods. The recently developed explicitly correlated coupledcluster methods yield CCSD(T) results with ... orders of magnitude. Using local electron correlation methods, which significantly reduce the increase...

Cytoscape
 Referenced in 23 articles
[sw09080]
 surveyed, including a search for interaction pathways correlating with changes in gene expression, a study...

GAP_
 Referenced in 11 articles
[sw04903]
 association plots: Information visualization via iteratively generated correlation matrices Given a pdimensional proximity matrix ... sequence of correlation matrices, 𝐑=(R (1) ,R (2) ,⋯), is iteratively formed from it. Here ... correlation matrix of the original proximity matrix D and R (n) is the correlation matrix...

glimmix
 Referenced in 19 articles
[sw11740]
 procedure fits statistical models to data with correlations or nonconstant variability and where the response...

metafor
 Referenced in 19 articles
[sw12291]
 analyses and metaanalyses accounting for known correlation structures (e.g., due to phylogenetic relatedness...