• MemHyb

  • Referenced in 15 articles [sw25194]
  • field of drug discovery, cell biology, and bioinformatics. The web server for the proposed MemHyb...
  • BioJava

  • Referenced in 10 articles [sw05334]
  • rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other ... important bioinformatics concepts. It can also read and write sequence data in a variety...
  • SynTReN

  • Referenced in 14 articles [sw12311]
  • expression data is an important subject in bioinformatics research. Validation of these algorithms requires benchmark...
  • iRNA-2methyl

  • Referenced in 14 articles [sw24530]
  • iRNA-2methyl will become a very useful bioinformatics tool for medicinal chemistry, helping to design...
  • iProt-Sub

  • Referenced in 14 articles [sw27604]
  • have developed iProt-Sub, a powerful bioinformatics tool for the accurate prediction of protease-specific...
  • GEOquery

  • Referenced in 9 articles [sw17285]
  • developed by the National Center for Bioinformatics (NCBI) at the National Institutes of Health ... data using novel and rigorous statistical and bioinformatic tools. Facilitating analyses and meta-analyses...
  • InterProScan

  • Referenced in 12 articles [sw17336]
  • Zdobnov and R. Apweiler (2001) Bioinformatics, 17, 847–848] is a tool that combines different...
  • ExPASy

  • Referenced in 12 articles [sw34228]
  • multidisciplinary team at the Swiss Institute of Bioinformatics (SIB). It provides access to a variety...
  • ELM

  • Referenced in 8 articles [sw17021]
  • server at http://elm.eu.org/, is a new bioinformatics resource for investigating candidate short non-globular ... proteins, aiming to fill the void in bioinformatics tools. Sequence comparisons with short motifs...
  • POSSUM

  • Referenced in 8 articles [sw24532]
  • POSSUM: a bioinformatics toolkit for generating numerical sequence feature descriptors based on PSSM profiles. Evolutionary ... more effective analysis and modeling pipeline for bioinformatics research. Availability and implementation: http://possum.erc.monash.edu...
  • iEnhancer-EL

  • Referenced in 11 articles [sw27668]
  • role in controlling gene expression. Although some bioinformatics tools were developed, they are limited...
  • bioNMF

  • Referenced in 6 articles [sw14438]
  • matrix factorization in biology. Background: In the Bioinformatics field, a great deal of interest ... interest on this technique by the bioinformatics community has been increased during the last ... multiple applications proposed in the bioinformatics field or to support new research using this method...
  • Bio2RDF

  • Referenced in 10 articles [sw23946]
  • million triples was built from 30 public bioinformatics data providers: GO, NCBI, UniProt, KEGG...
  • MEIGO

  • Referenced in 5 articles [sw08492]
  • global optimization in systems biology and bioinformatics. Optimization is key to solve many problems ... diverse problems arising in systems biology and bioinformatics: enhanced scatter search method (eSS) for continuous ... series of case studies in bioinformatics and systems biology, outperforming other state ... multiple domains of systems biology and bioinformatics. It includes ecient state of the art metaheuristics...
  • GOTM

  • Referenced in 9 articles [sw13869]
  • genes that are difficult to analyze directly. Bioinformatics tools are needed to interpret the functional...
  • Carpenter

  • Referenced in 6 articles [sw26985]
  • long biological datasets. The growth of bioinformatics has resulted in datasets with new characteristics. These ... number of rows. Several experiments on real bioinformatics datasets show that CARPENTER is orders...
  • Chameleon

  • Referenced in 8 articles [sw17690]
  • applications such as High Energy Physics and Bioinformatics require both Computational and Data Grid features...
  • FABIA

  • Referenced in 8 articles [sw23382]
  • Clevert. FABIA: Factor Analysis for Bicluster Acquisition, Bioinformatics...
  • Proteinortho

  • Referenced in 8 articles [sw29601]
  • found in Lechner et al., BMC Bioinformatics. 2011 Apr 28;12:124. To enhance...
  • iLoc-lncRNA

  • Referenced in 8 articles [sw30465]
  • PseKNC. Results: We developed a sequence-based bioinformatics tool called ‘iLoc-lncRNA’ to predict...